RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 USP30Q70CQ3 517 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 FKBP9P1Q75LS8 142 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 TAX1BP1Q86VP1 789 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 PHYKPLQ8IUZ5 450 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 C7orf31Q8N865 590 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 NKD2Q969F2 451 aaPredicted RBP5.31□□□□□ -1.56
RFC4-213ENST00000489028 PITHD1Q9GZP4 211 aaPredicted RBP5.31□□□□□ -1.56
RFC4-213ENST00000489028 HAPLN2Q9GZV7 340 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 EMC7Q9NPA0 242 aa5.31□□□□□ -1.56
RFC4-213ENST00000489028 APOL3O95236 402 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 ADRB1P08588 477 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 ZNF20P17024 532 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 BPIP17213 487 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 CR2P20023 1033 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 CD40P25942 277 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 STAT3P40763 770 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 MASP1P48740 699 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 ADCY2Q08462 1091 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 CDSNQ15517 529 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 TERF2Q15554 542 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 DGKDQ16760 1214 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 ZNF568Q3ZCX4 644 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 KIAA1841Q6NSI8 718 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 ZZZ3Q8IYH5 903 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 Q8TCH9 128 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 MTG2Q9H4K7 406 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 KCMF1Q9P0J7 381 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 SAE1Q9UBE0 346 aaPredicted RBP5.3□□□□□ -1.56
RFC4-213ENST00000489028 MSRAQ9UJ68 235 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 FAM184BQ9ULE4 1060 aa5.3□□□□□ -1.56
RFC4-213ENST00000489028 CTDP1Q9Y5B0 961 aaPredicted RBP5.3□□□□□ -1.56
RFC4-213ENST00000489028 A0A0A6YYJ9 748 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 A0A0A6YYK5 440 aaPredicted RBP5.29□□□□□ -1.56
RFC4-213ENST00000489028 C2orf78A6NCI8 922 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 NEMP1O14524 444 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 CDC14BO60729 498 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 PHC1P78364 1004 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 SAFB2Q14151 953 aaKnown RBP eCLIP5.29□□□□□ -1.56
RFC4-213ENST00000489028 SART3Q15020 963 aaKnown RBP5.29□□□□□ -1.56
RFC4-213ENST00000489028 DHCR24Q15392 516 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 GPR158Q5T848 1215 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 BMP8AQ7Z5Y6 402 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 GPR135Q8IZ08 494 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 FUKQ8N0W3 1084 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 ZNF610Q8N9Z0 462 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 DYDC2Q96IM9 177 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 SOX7Q9BT81 388 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 PLA2G12BQ9BX93 195 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 AGO3Q9H9G7 860 aaKnown RBP5.29□□□□□ -1.56
RFC4-213ENST00000489028 DNAI1Q9UI46 699 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 DENND2AQ9ULE3 1009 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 ZFR2Q9UPR6 939 aaKnown RBP5.29□□□□□ -1.56
RFC4-213ENST00000489028 JAG2Q9Y219 1238 aa5.29□□□□□ -1.56
RFC4-213ENST00000489028 OPHN1O60890 802 aa5.28□□□□□ -1.56
RFC4-213ENST00000489028 ZNF623O75123 536 aa5.28□□□□□ -1.56
RFC4-213ENST00000489028 HNRNPLP14866 589 aaKnown RBP eCLIP5.28□□□□□ -1.56
RFC4-213ENST00000489028 BCAR1P56945 870 aa5.28□□□□□ -1.56
RFC4-213ENST00000489028 ADAM8P78325 824 aa5.28□□□□□ -1.56
RFC4-213ENST00000489028 ATP2C1P98194 919 aaPredicted RBP5.28□□□□□ -1.56
RFC4-213ENST00000489028 R3HDM1Q15032 1099 aaKnown RBP5.28□□□□□ -1.56
RFC4-213ENST00000489028 LCE5AQ5TCM9 118 aa5.28□□□□□ -1.56
RFC4-213ENST00000489028 TIGD7Q6NT04 549 aaPredicted RBP5.28□□□□□ -1.56
RFC4-213ENST00000489028 ZNF585AQ6P3V2 769 aa5.28□□□□□ -1.56
RFC4-213ENST00000489028 KLHDC10Q6PID8 442 aa5.28□□□□□ -1.56
RFC4-213ENST00000489028 PASD1Q8IV76 773 aa5.28□□□□□ -1.56
RFC4-213ENST00000489028 GIMAP8Q8ND71 665 aaPredicted RBP5.28□□□□□ -1.56
RFC4-213ENST00000489028 C1QTNF3Q9BXJ4 246 aa5.28□□□□□ -1.56
RFC4-213ENST00000489028 C12orf65Q9H3J6 166 aaKnown RBP5.28□□□□□ -1.56
RFC4-213ENST00000489028 POLR3BQ9NW08 1133 aaPredicted RBP5.28□□□□□ -1.56
RFC4-213ENST00000489028 PUF60Q9UHX1 559 aaKnown RBP5.28□□□□□ -1.56
RFC4-213ENST00000489028 VWA7Q9Y334 891 aa5.28□□□□□ -1.56
RFC4-213ENST00000489028 RAD17O75943 681 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 LSP1P33241 339 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 ADCY7P51828 1080 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 OCRLQ01968 901 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 STRN3Q13033 797 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 DDB1Q16531 1140 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 ATP13A4Q4VNC1 1196 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 BROXQ5VW32 411 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 EGFLAMQ63HQ2 1017 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 CLEC14AQ86T13 490 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 GGNQ86UU5 652 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 CXorf67Q86X51 503 aaPredicted RBP5.27□□□□□ -1.57
RFC4-213ENST00000489028 CHST13Q8NET6 341 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 RPGRQ92834 1020 aaKnown RBP5.27□□□□□ -1.57
RFC4-213ENST00000489028 SLC5A5Q92911 643 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 OR14A2Q96R54 314 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 FAM126AQ9BYI3 521 aaPredicted RBP5.27□□□□□ -1.57
RFC4-213ENST00000489028 KLC2Q9H0B6 622 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 SLKQ9H2G2 1235 aaPredicted RBP5.27□□□□□ -1.57
RFC4-213ENST00000489028 PRDM12Q9H4Q4 367 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 CAAP1Q9H8G2 361 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 PPP2R3BQ9Y5P8 575 aa5.27□□□□□ -1.57
RFC4-213ENST00000489028 PRSS38A1L453 326 aa5.26□□□□□ -1.57
RFC4-213ENST00000489028 SLC26A4O43511 780 aa5.26□□□□□ -1.57
RFC4-213ENST00000489028 PCDH8O95206 1070 aa5.26□□□□□ -1.57
RFC4-213ENST00000489028 PFKMP08237 780 aa5.26□□□□□ -1.57
RFC4-213ENST00000489028 Q6ZSN1 163 aa5.26□□□□□ -1.57
RFC4-213ENST00000489028 LHFPL2Q6ZUX7 228 aa5.26□□□□□ -1.57
RFC4-213ENST00000489028 ESPNLQ6ZVH7 1005 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms