RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 TMEM39AQ9NV64 488 aa17.01■□□□□ 0.31
CCM2-215ENST00000482714 LARSQ9P2J5 1176 aaKnown RBP17.01■□□□□ 0.31
CCM2-215ENST00000482714 SQORQ9Y6N5 450 aa17.01■□□□□ 0.31
CCM2-215ENST00000482714 KIAA0355O15063 1070 aa17■□□□□ 0.31
CCM2-215ENST00000482714 NR1I2O75469 434 aa17■□□□□ 0.31
CCM2-215ENST00000482714 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
CCM2-215ENST00000482714 TRIM71Q2Q1W2 868 aaKnown RBP17■□□□□ 0.31
CCM2-215ENST00000482714 FAM26DQ5JW98 314 aa17■□□□□ 0.31
CCM2-215ENST00000482714 ZNF410Q86VK4 478 aa17■□□□□ 0.31
CCM2-215ENST00000482714 SLC17A8Q8NDX2 589 aa17■□□□□ 0.31
CCM2-215ENST00000482714 DNAJB3Q8WWF6 145 aa17■□□□□ 0.31
CCM2-215ENST00000482714 PRPF31Q8WWY3 499 aaKnown RBP17■□□□□ 0.31
CCM2-215ENST00000482714 DDX12PQ92771 950 aa17■□□□□ 0.31
CCM2-215ENST00000482714 PAGE5Q96GU1 130 aa17■□□□□ 0.31
CCM2-215ENST00000482714 PVALEFA0A1B0GWK0 134 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 MYMKA6NI61 221 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 M0QZ92 97 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 KRT18P05783 430 aaKnown RBP16.99■□□□□ 0.31
CCM2-215ENST00000482714 LIG1P18858 919 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 ABCD1P33897 745 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 GIT2Q14161 759 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 TFDP1Q14186 410 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 DHX8Q14562 1220 aaKnown RBP16.99■□□□□ 0.31
CCM2-215ENST00000482714 LRRC71Q8N4P6 559 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 USP38Q8NB14 1042 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 PPP1R13LQ8WUF5 828 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 KCNN1Q92952 543 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 TMEM143Q96AN5 459 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 IFT74Q96LB3 600 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 RUSC1Q9BVN2 902 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 NFKBIZQ9BYH8 718 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 TRIM9Q9C026 710 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 INO80BQ9C086 356 aaPredicted RBP16.99■□□□□ 0.31
CCM2-215ENST00000482714 DACT1Q9NYF0 836 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 SEL1LQ9UBV2 794 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 TBX21Q9UL17 535 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 COL4A3BPQ9Y5P4 624 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 TRIP12Q14669 1992 aaPredicted RBP16.99■□□□□ 0.31
CCM2-215ENST00000482714 GTPBP6O43824 516 aaPredicted RBP16.99■□□□□ 0.31
CCM2-215ENST00000482714 THPOP40225 353 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 CLCN3P51790 818 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 ZNF131P52739 623 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 SMTNP53814 917 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 PCBP1Q15365 356 aaKnown RBP eCLIP16.99■□□□□ 0.31
CCM2-215ENST00000482714 TPRNQ4KMQ1 711 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 FAM102BQ5T8I3 360 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 RUFY4Q6ZNE9 571 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 CCDC65Q8IXS2 484 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 DNAJC19Q96DA6 116 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 CELF4Q9BZC1 486 aaKnown RBP16.99■□□□□ 0.31
CCM2-215ENST00000482714 PRKAG2Q9UGJ0 569 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 AKT3Q9Y243 479 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 PHLPP2Q6ZVD8 1323 aa16.99■□□□□ 0.31
CCM2-215ENST00000482714 EVI5O60447 810 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 HIP1RO75146 1068 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 MAPTP10636 758 aaKnown RBP16.98■□□□□ 0.31
CCM2-215ENST00000482714 CKBP12277 381 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 SELPP16109 830 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 GAP43P17677 238 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 NAMPTP43490 491 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 CRYBB1P53674 252 aaPredicted RBP16.98■□□□□ 0.31
CCM2-215ENST00000482714 MRPS6P82932 125 aaKnown RBP16.98■□□□□ 0.31
CCM2-215ENST00000482714 MDM2Q00987 491 aaPredicted RBP16.98■□□□□ 0.31
CCM2-215ENST00000482714 LAMTOR4Q0VGL1 99 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 ODR4Q5SWX8 454 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 IFNLR1Q8IU57 520 aaPredicted RBP16.98■□□□□ 0.31
CCM2-215ENST00000482714 SPIRE2Q8WWL2 714 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 DHX38Q92620 1227 aaKnown RBP16.98■□□□□ 0.31
CCM2-215ENST00000482714 NOC4LQ9BVI4 516 aaKnown RBP16.98■□□□□ 0.31
CCM2-215ENST00000482714 GTPBP4Q9BZE4 634 aaKnown RBP16.98■□□□□ 0.31
CCM2-215ENST00000482714 FAM49AQ9H0Q0 323 aaPredicted RBP16.98■□□□□ 0.31
CCM2-215ENST00000482714 HIPK3Q9H422 1215 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 PARVGQ9HBI0 331 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 NR2E3Q9Y5X4 410 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 EVPLQ92817 2033 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 PDE4DIPQ5VU43 2346 aa16.98■□□□□ 0.31
CCM2-215ENST00000482714 FRMD3A2A2Y4 597 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 RSPH10B2B2RC85 870 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 H0YCG3 227 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 TBCAO75347 108 aaKnown RBP16.97■□□□□ 0.31
CCM2-215ENST00000482714 FAM13AO94988 1023 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 TIMP1P01033 207 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 RSPH10BP0C881 870 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 PLS3P13797 630 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 GLRA2P23416 452 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 AFMP43652 599 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 GPC3P51654 580 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 NLRP11P59045 1033 aaKnown RBP16.97■□□□□ 0.31
CCM2-215ENST00000482714 DRP2Q13474 957 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 SKOR2Q2VWA4 1001 aaPredicted RBP16.97■□□□□ 0.31
CCM2-215ENST00000482714 MAEAQ7L5Y9 396 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 SRGAP1Q7Z6B7 1085 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 RHPN2Q8IUC4 686 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 DAW1Q8N136 415 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 DPF3Q92784 378 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 CCDC47Q96A33 483 aaKnown RBP16.97■□□□□ 0.31
CCM2-215ENST00000482714 REEP2Q9BRK0 252 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 POLR3FQ9H1D9 316 aaPredicted RBP16.97■□□□□ 0.31
CCM2-215ENST00000482714 ADAMTS10Q9H324 1103 aa16.97■□□□□ 0.31
CCM2-215ENST00000482714 TRPV2Q9Y5S1 764 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms