RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 SV2BQ7L1I2 683 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 EXOC8Q8IYI6 725 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 FMR1NBQ8N0W7 255 aaPredicted RBP17.01■□□□□ 0.31
SEC13-215ENST00000477547 CCDC155Q8N6L0 562 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 LINC01465Q8N7H1 131 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 DHX38Q92620 1227 aaKnown RBP17.01■□□□□ 0.31
SEC13-215ENST00000477547 WNT8BQ93098 351 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 MAP7D2Q96T17 732 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 CDX2Q99626 313 aaPredicted RBP17.01■□□□□ 0.31
SEC13-215ENST00000477547 TNMDQ9H2S6 317 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 KCND2Q9NZV8 630 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 SERTAD1Q9UHV2 236 aa17.01■□□□□ 0.31
SEC13-215ENST00000477547 IGKV6-21A0A0C4DH24 114 aa17■□□□□ 0.31
SEC13-215ENST00000477547 ZNF202O95125 648 aa17■□□□□ 0.31
SEC13-215ENST00000477547 KRT18P05783 430 aaKnown RBP17■□□□□ 0.31
SEC13-215ENST00000477547 CYP11B2P19099 503 aa17■□□□□ 0.31
SEC13-215ENST00000477547 TMOD1P28289 359 aa17■□□□□ 0.31
SEC13-215ENST00000477547 RAD51AP2Q09MP3 1159 aa17■□□□□ 0.31
SEC13-215ENST00000477547 DRP2Q13474 957 aa17■□□□□ 0.31
SEC13-215ENST00000477547 ZNF697Q5TEC3 545 aa17■□□□□ 0.31
SEC13-215ENST00000477547 RINT1Q6NUQ1 792 aa17■□□□□ 0.31
SEC13-215ENST00000477547 MAEAQ7L5Y9 396 aa17■□□□□ 0.31
SEC13-215ENST00000477547 DNAJB3Q8WWF6 145 aa17■□□□□ 0.31
SEC13-215ENST00000477547 TCP11Q8WWU5 503 aa17■□□□□ 0.31
SEC13-215ENST00000477547 TMEM143Q96AN5 459 aa17■□□□□ 0.31
SEC13-215ENST00000477547 POLR3FQ9H1D9 316 aaPredicted RBP17■□□□□ 0.31
SEC13-215ENST00000477547 PRDM5Q9NQX1 630 aaPredicted RBP17■□□□□ 0.31
SEC13-215ENST00000477547 PDLIM7Q9NR12 457 aa17■□□□□ 0.31
SEC13-215ENST00000477547 AKT3Q9Y243 479 aa17■□□□□ 0.31
SEC13-215ENST00000477547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.99■□□□□ 0.31
SEC13-215ENST00000477547 KINO60870 393 aaKnown RBP16.99■□□□□ 0.31
SEC13-215ENST00000477547 NR1I2O75469 434 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 CTSHP09668 335 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 SLFN14P0C7P3 912 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 GUCY2CP25092 1073 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 MCM4P33991 863 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 DNM2P50570 870 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 CACNB1Q02641 598 aaPredicted RBP16.99■□□□□ 0.31
SEC13-215ENST00000477547 FAAP100Q0VG06 881 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 LONRF3Q496Y0 759 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 FAM102BQ5T8I3 360 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 KRBA2Q6ZNG9 492 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 C1orf186Q6ZWK4 172 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 RSPH3Q86UC2 560 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 CNNM3Q8NE01 707 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 ENGASEQ8NFI3 743 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 MAFAQ8NHW3 353 aaPredicted RBP16.99■□□□□ 0.31
SEC13-215ENST00000477547 PSPC1Q8WXF1 523 aaKnown RBP16.99■□□□□ 0.31
SEC13-215ENST00000477547 STAMQ92783 540 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 REEP2Q9BRK0 252 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 GPRC5CQ9NQ84 441 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 KBTBD4Q9NVX7 518 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 TBX21Q9UL17 535 aa16.99■□□□□ 0.31
SEC13-215ENST00000477547 NPHP3-ACAD11A0A0J9YXS1 232 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 HIP1RO75146 1068 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 TBCAO75347 108 aaKnown RBP16.98■□□□□ 0.31
SEC13-215ENST00000477547 VTNP04004 478 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 RPLP2P05387 115 aaKnown RBP16.98■□□□□ 0.31
SEC13-215ENST00000477547 THPOP40225 353 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 AFMP43652 599 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 MKRN4PQ13434 485 aaPredicted RBP16.98■□□□□ 0.31
SEC13-215ENST00000477547 SNW1Q13573 536 aaKnown RBP16.98■□□□□ 0.31
SEC13-215ENST00000477547 TRIM71Q2Q1W2 868 aaKnown RBP16.98■□□□□ 0.31
SEC13-215ENST00000477547 GRAMD1CQ8IYS0 662 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 CAGE1Q8TC20 777 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 CCDC34Q96HJ3 373 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 DRC1Q96MC2 740 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 PPP1R16BQ96T49 567 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 LBHD1Q9BQE6 289 aaPredicted RBP16.98■□□□□ 0.31
SEC13-215ENST00000477547 NOC4LQ9BVI4 516 aaKnown RBP16.98■□□□□ 0.31
SEC13-215ENST00000477547 TIPINQ9BVW5 301 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 HIPK3Q9H422 1215 aa16.98■□□□□ 0.31
SEC13-215ENST00000477547 MYMKA6NI61 221 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 M0QZ92 97 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 CAND2O75155 1236 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 MRPS6P82932 125 aaKnown RBP16.97■□□□□ 0.31
SEC13-215ENST00000477547 RBL2Q08999 1139 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 TMEM62Q0P6H9 643 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 MAPK7Q13164 816 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 BFSP2Q13515 415 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 ARSHQ5FYA8 562 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 IER5Q5VY09 327 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 DYMQ7RTS9 669 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 KIAA0319LQ8IZA0 1049 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 MYLIPQ8WY64 445 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 DDX12PQ92771 950 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 KIFAP3Q92845 792 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 SCLT1Q96NL6 688 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 PPP1R12CQ9BZL4 782 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 LRRC27Q9C0I9 530 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 TMEM39AQ9NV64 488 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 DACT1Q9NYF0 836 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 SUCLA2Q9P2R7 463 aaPredicted RBP16.97■□□□□ 0.31
SEC13-215ENST00000477547 ODF2LQ9ULJ1 636 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 COL4A3BPQ9Y5P4 624 aa16.97■□□□□ 0.31
SEC13-215ENST00000477547 RSPH10B2B2RC85 870 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 FAM13AO94988 1023 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 RSPH10BP0C881 870 aa16.96■□□□□ 0.31
SEC13-215ENST00000477547 ASIC1P78348 528 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms