RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 TMEM161AQ9NX61 479 aa22.92■■□□□ 1.26
SNX13-206ENST00000474067 COL4A4P53420 1690 aaPredicted RBP22.92■■□□□ 1.26
SNX13-206ENST00000474067 LOXHD1Q8IVV2 1947 aa22.91■■□□□ 1.26
SNX13-206ENST00000474067 IGKV6-21A0A0C4DH24 114 aa22.91■■□□□ 1.26
SNX13-206ENST00000474067 CARNS1A5YM72 827 aa22.91■■□□□ 1.26
SNX13-206ENST00000474067 NCK2O43639 380 aa22.91■■□□□ 1.26
SNX13-206ENST00000474067 DARSP14868 501 aaKnown RBP22.91■■□□□ 1.26
SNX13-206ENST00000474067 YWHABP31946 246 aaKnown RBP22.91■■□□□ 1.26
SNX13-206ENST00000474067 ANO5Q75V66 913 aa22.91■■□□□ 1.26
SNX13-206ENST00000474067 TMEM40Q8WWA1 233 aa22.91■■□□□ 1.26
SNX13-206ENST00000474067 LINC01599Q8WXQ3 324 aa22.91■■□□□ 1.26
SNX13-206ENST00000474067 HLA-CQ95604 372 aa22.91■■□□□ 1.26
SNX13-206ENST00000474067 PPP1R16BQ96T49 567 aa22.91■■□□□ 1.26
SNX13-206ENST00000474067 ADAMTS10Q9H324 1103 aa22.91■■□□□ 1.26
SNX13-206ENST00000474067 RC3H2Q9HBD1 1191 aaKnown RBP22.91■■□□□ 1.26
SNX13-206ENST00000474067 SUCLA2Q9P2R7 463 aaPredicted RBP22.91■■□□□ 1.26
SNX13-206ENST00000474067 EML1O00423 815 aa22.9■■□□□ 1.26
SNX13-206ENST00000474067 ASAP2O43150 1006 aa22.9■■□□□ 1.26
SNX13-206ENST00000474067 FOSBP53539 338 aa22.9■■□□□ 1.26
SNX13-206ENST00000474067 EARS2Q5JPH6 523 aaKnown RBP22.9■■□□□ 1.26
SNX13-206ENST00000474067 RTN4RL1Q86UN2 441 aaPredicted RBP22.9■■□□□ 1.26
SNX13-206ENST00000474067 ABI1Q8IZP0 508 aa22.9■■□□□ 1.26
SNX13-206ENST00000474067 ERMNQ8TAM6 284 aa22.9■■□□□ 1.26
SNX13-206ENST00000474067 PSPC1Q8WXF1 523 aaKnown RBP22.9■■□□□ 1.26
SNX13-206ENST00000474067 KIF2CQ99661 725 aa22.9■■□□□ 1.26
SNX13-206ENST00000474067 TMX1Q9H3N1 280 aa22.9■■□□□ 1.26
SNX13-206ENST00000474067 CDHR5Q9HBB8 845 aa22.9■■□□□ 1.26
SNX13-206ENST00000474067 STK24Q9Y6E0 443 aa22.9■■□□□ 1.26
SNX13-206ENST00000474067 C9IYK1 514 aa22.89■■□□□ 1.25
SNX13-206ENST00000474067 PCBP1Q15365 356 aaKnown RBP eCLIP22.89■■□□□ 1.25
SNX13-206ENST00000474067 PCDHB12Q9Y5F1 795 aa22.89■■□□□ 1.25
SNX13-206ENST00000474067 CDH23Q9H251 3354 aa22.89■■□□□ 1.25
SNX13-206ENST00000474067 NLRC5Q86WI3 1866 aa22.89■■□□□ 1.25
SNX13-206ENST00000474067 STBD1O95210 358 aa22.88■■□□□ 1.25
SNX13-206ENST00000474067 LYPLA2O95372 231 aa22.88■■□□□ 1.25
SNX13-206ENST00000474067 TXKP42681 527 aa22.88■■□□□ 1.25
SNX13-206ENST00000474067 ST3GAL1Q11201 340 aa22.88■■□□□ 1.25
SNX13-206ENST00000474067 SPOUT1Q5T280 376 aaKnown RBP22.88■■□□□ 1.25
SNX13-206ENST00000474067 RHPN2Q8IUC4 686 aa22.88■■□□□ 1.25
SNX13-206ENST00000474067 NOSTRINQ8IVI9 506 aa22.88■■□□□ 1.25
SNX13-206ENST00000474067 TPH2Q8IWU9 490 aa22.88■■□□□ 1.25
SNX13-206ENST00000474067 CRIPAKQ8N1N5 446 aa22.88■■□□□ 1.25
SNX13-206ENST00000474067 EIF2AK1Q9BQI3 630 aaKnown RBP22.88■■□□□ 1.25
SNX13-206ENST00000474067 COL25A1Q9BXS0 654 aaPredicted RBP22.88■■□□□ 1.25
SNX13-206ENST00000474067 RAB34Q9BZG1 259 aa22.88■■□□□ 1.25
SNX13-206ENST00000474067 ANKEF1Q9NU02 776 aa22.88■■□□□ 1.25
SNX13-206ENST00000474067 FAM205CA6NFA0 338 aa22.87■■□□□ 1.25
SNX13-206ENST00000474067 EOMESO95936 686 aa22.87■■□□□ 1.25
SNX13-206ENST00000474067 XRCC6P12956 609 aaKnown RBP eCLIP22.87■■□□□ 1.25
SNX13-206ENST00000474067 MCM7P33993 719 aa22.87■■□□□ 1.25
SNX13-206ENST00000474067 GUCY1B3Q02153 619 aa22.87■■□□□ 1.25
SNX13-206ENST00000474067 SPIRE1Q08AE8 756 aa22.87■■□□□ 1.25
SNX13-206ENST00000474067 NCBP1Q09161 790 aaKnown RBP22.87■■□□□ 1.25
SNX13-206ENST00000474067 MXD4Q14582 209 aaPredicted RBP22.87■■□□□ 1.25
SNX13-206ENST00000474067 XKR9Q5GH70 373 aa22.87■■□□□ 1.25
SNX13-206ENST00000474067 HAUS3Q68CZ6 603 aa22.87■■□□□ 1.25
SNX13-206ENST00000474067 DYDC2Q96IM9 177 aa22.87■■□□□ 1.25
SNX13-206ENST00000474067 MTRQ99707 1265 aa22.87■■□□□ 1.25
SNX13-206ENST00000474067 NSUN3Q9H649 340 aaKnown RBP22.87■■□□□ 1.25
SNX13-206ENST00000474067 DHX33Q9H6R0 707 aaKnown RBP22.87■■□□□ 1.25
SNX13-206ENST00000474067 COL4A3BPQ9Y5P4 624 aa22.87■■□□□ 1.25
SNX13-206ENST00000474067 FSD2A1L4K1 749 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 DGAT1O75907 488 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 RAB27AP51159 221 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 FAM189BP81408 668 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 CYP4A11Q02928 519 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 TFDP1Q14186 410 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 PLA2G4FQ68DD2 849 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 SPRED2Q7Z698 418 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 SRGAP1Q7Z6B7 1085 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 NLRP4Q96MN2 994 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 MTMR9Q96QG7 549 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 CEP89Q96ST8 783 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 TMEM117Q9H0C3 514 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 TUFT1Q9NNX1 390 aa22.86■■□□□ 1.25
SNX13-206ENST00000474067 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.86■■□□□ 1.25
SNX13-206ENST00000474067 A0A087WZ62 844 aa22.85■■□□□ 1.25
SNX13-206ENST00000474067 MGEA5O60502 916 aa22.85■■□□□ 1.25
SNX13-206ENST00000474067 DTNBO60941 627 aa22.85■■□□□ 1.25
SNX13-206ENST00000474067 OR52Z1P0C646 297 aa22.85■■□□□ 1.25
SNX13-206ENST00000474067 ATP2B1P20020 1258 aa22.85■■□□□ 1.25
SNX13-206ENST00000474067 UBE3AQ05086 875 aa22.85■■□□□ 1.25
SNX13-206ENST00000474067 DSC3Q14574 896 aa22.85■■□□□ 1.25
SNX13-206ENST00000474067 FDXACB1Q9BRP7 624 aaPredicted RBP22.85■■□□□ 1.25
SNX13-206ENST00000474067 MRPL9Q9BYD2 267 aaKnown RBP22.85■■□□□ 1.25
SNX13-206ENST00000474067 RGL1Q9NZL6 768 aa22.85■■□□□ 1.25
SNX13-206ENST00000474067 PRRC2BQ5JSZ5 2229 aaKnown RBP22.84■■□□□ 1.25
SNX13-206ENST00000474067 A0A0U1RQF3 1178 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 TBKBP1A7MCY6 615 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 LAD1O00515 517 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 SLITRK3O94933 977 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 LAG3P18627 525 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 IBSPP21815 317 aaPredicted RBP22.84■■□□□ 1.25
SNX13-206ENST00000474067 MUTP22033 750 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 CTTNQ14247 550 aaKnown RBP22.84■■□□□ 1.25
SNX13-206ENST00000474067 EMC2Q15006 297 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 PUS10Q3MIT2 529 aaKnown RBP22.84■■□□□ 1.25
SNX13-206ENST00000474067 PAN2Q504Q3 1202 aaKnown RBP22.84■■□□□ 1.25
SNX13-206ENST00000474067 TTC38Q5R3I4 469 aa22.84■■□□□ 1.25
SNX13-206ENST00000474067 CATSPER4Q7RTX7 472 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms