RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 SLC7A6OSQ96CW6 309 aaPredicted RBP6.6□□□□□ -1.35
UBR4-209ENST00000465036 SH3BP1Q9Y3L3 701 aa6.6□□□□□ -1.35
UBR4-209ENST00000465036 CCDC9Q9Y3X0 531 aaKnown RBP6.6□□□□□ -1.35
UBR4-209ENST00000465036 DNMBPQ6XZF7 1577 aa6.6□□□□□ -1.35
UBR4-209ENST00000465036 ZNF608Q9ULD9 1512 aaPredicted RBP6.6□□□□□ -1.35
UBR4-209ENST00000465036 KDM2BQ8NHM5 1336 aa6.59□□□□□ -1.35
UBR4-209ENST00000465036 HIP1RO75146 1068 aa6.59□□□□□ -1.35
UBR4-209ENST00000465036 SAFB2Q14151 953 aaKnown RBP eCLIP6.59□□□□□ -1.35
UBR4-209ENST00000465036 FSTL4Q6MZW2 842 aa6.59□□□□□ -1.35
UBR4-209ENST00000465036 CC2D1AQ6P1N0 951 aaPredicted RBP6.59□□□□□ -1.35
UBR4-209ENST00000465036 RTN4RL1Q86UN2 441 aaPredicted RBP6.59□□□□□ -1.35
UBR4-209ENST00000465036 JMYQ8N9B5 988 aa6.59□□□□□ -1.35
UBR4-209ENST00000465036 E2F7Q96AV8 911 aa6.59□□□□□ -1.35
UBR4-209ENST00000465036 TMEM176AQ96HP8 235 aa6.59□□□□□ -1.35
UBR4-209ENST00000465036 NDOR1Q9UHB4 597 aa6.59□□□□□ -1.35
UBR4-209ENST00000465036 COQ6Q9Y2Z9 468 aa6.59□□□□□ -1.35
UBR4-209ENST00000465036 A0A1W2PRX2 142 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 ZBTB48P10074 688 aaPredicted RBP6.58□□□□□ -1.36
UBR4-209ENST00000465036 FNTBP49356 437 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 NANOS3P60323 173 aaKnown RBP6.58□□□□□ -1.36
UBR4-209ENST00000465036 ADAM15Q13444 863 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 SERINC3Q13530 473 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 GAGE13Q4V321 117 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 ZNF662Q6ZS27 426 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 ZNF627Q7L945 461 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 SLC7A14Q8TBB6 771 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 SCLYQ96I15 445 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 SAE1Q9UBE0 346 aaPredicted RBP6.58□□□□□ -1.36
UBR4-209ENST00000465036 DMRT1Q9Y5R6 373 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 CUX1P39880 1505 aa6.58□□□□□ -1.36
UBR4-209ENST00000465036 RASGRP1O95267 797 aa6.57□□□□□ -1.36
UBR4-209ENST00000465036 KCNA6P17658 529 aa6.57□□□□□ -1.36
UBR4-209ENST00000465036 ADAM8P78325 824 aa6.57□□□□□ -1.36
UBR4-209ENST00000465036 CRHR2Q13324 411 aa6.57□□□□□ -1.36
UBR4-209ENST00000465036 TMEM132BQ14DG7 1078 aa6.57□□□□□ -1.36
UBR4-209ENST00000465036 Q6ZPA2 131 aa6.57□□□□□ -1.36
UBR4-209ENST00000465036 CLIP3Q96DZ5 547 aa6.57□□□□□ -1.36
UBR4-209ENST00000465036 AGAP2Q99490 1192 aa6.57□□□□□ -1.36
UBR4-209ENST00000465036 MRPL4Q9BYD3 311 aaKnown RBP6.57□□□□□ -1.36
UBR4-209ENST00000465036 POLA1P09884 1462 aaPredicted RBP6.57□□□□□ -1.36
UBR4-209ENST00000465036 IFT140Q96RY7 1462 aa6.57□□□□□ -1.36
UBR4-209ENST00000465036 RAD54L2Q9Y4B4 1467 aa6.57□□□□□ -1.36
UBR4-209ENST00000465036 TRAF5O00463 557 aa6.56□□□□□ -1.36
UBR4-209ENST00000465036 KRT4P19013 534 aa6.56□□□□□ -1.36
UBR4-209ENST00000465036 ATP2C1P98194 919 aaPredicted RBP6.56□□□□□ -1.36
UBR4-209ENST00000465036 RASA3Q14644 834 aa6.56□□□□□ -1.36
UBR4-209ENST00000465036 ARHGAP44Q17R89 818 aa6.56□□□□□ -1.36
UBR4-209ENST00000465036 NKD2Q969F2 451 aaPredicted RBP6.56□□□□□ -1.36
UBR4-209ENST00000465036 ARMC5Q96C12 935 aa6.56□□□□□ -1.36
UBR4-209ENST00000465036 HIRIP3Q9BW71 556 aaPredicted RBP6.56□□□□□ -1.36
UBR4-209ENST00000465036 BOCQ9BWV1 1114 aa6.56□□□□□ -1.36
UBR4-209ENST00000465036 SLC2A4RGQ9NR83 387 aa6.56□□□□□ -1.36
UBR4-209ENST00000465036 REXO2Q9Y3B8 237 aaKnown RBP6.56□□□□□ -1.36
UBR4-209ENST00000465036 ABCC8Q09428 1581 aa6.56□□□□□ -1.36
UBR4-209ENST00000465036 AQRO60306 1485 aaKnown RBP eCLIP6.55□□□□□ -1.363e-9■□□□□ 10
UBR4-209ENST00000465036 FGD5Q6ZNL6 1462 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 TARBP1Q13395 1621 aaKnown RBP6.55□□□□□ -1.36
UBR4-209ENST00000465036 TCRBV16S1A1N1A0A5B0 115 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 C2orf78A6NCI8 922 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 TMEM191CA6NGB0 347 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 CCDC85CA6NKD9 419 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 FOXN1O15353 648 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 RAMP2O60895 175 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 ATP2B1P20020 1258 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 MAN2A2P49641 1150 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 SCNN1GP51170 649 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 SLC25A3Q00325 362 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 IRF9Q00978 393 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 TMEM177Q53S58 311 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 HTR3DQ70Z44 454 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 DNAJC10Q8IXB1 793 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 C2orf69Q8N8R5 385 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 GPHA2Q96T91 129 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 GPRC5BQ9NZH0 403 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 SFMBT1Q9UHJ3 866 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 DENND2AQ9ULE3 1009 aa6.55□□□□□ -1.36
UBR4-209ENST00000465036 PPFIA2O75334 1257 aa6.54□□□□□ -1.36
UBR4-209ENST00000465036 PRLP01236 227 aa6.54□□□□□ -1.36
UBR4-209ENST00000465036 MECP2P51608 486 aaKnown RBP6.54□□□□□ -1.36
UBR4-209ENST00000465036 ROM1Q03395 351 aa6.54□□□□□ -1.36
UBR4-209ENST00000465036 CNGB1Q14028 1251 aaPredicted RBP6.54□□□□□ -1.36
UBR4-209ENST00000465036 TOB2Q14106 344 aaPredicted RBP6.54□□□□□ -1.36
UBR4-209ENST00000465036 DGKDQ16760 1214 aa6.54□□□□□ -1.36
UBR4-209ENST00000465036 NAALADL2Q58DX5 795 aa6.54□□□□□ -1.36
UBR4-209ENST00000465036 FAM111BQ6SJ93 734 aa6.54□□□□□ -1.36
UBR4-209ENST00000465036 Q6ZRM9 215 aa6.54□□□□□ -1.36
UBR4-209ENST00000465036 GSPT2Q8IYD1 628 aaKnown RBP6.54□□□□□ -1.36
UBR4-209ENST00000465036 GCDHQ92947 438 aaPredicted RBP6.54□□□□□ -1.36
UBR4-209ENST00000465036 ZNF428Q96B54 188 aa6.54□□□□□ -1.36
UBR4-209ENST00000465036 ZG16BQ96DA0 208 aa6.54□□□□□ -1.36
UBR4-209ENST00000465036 TDRD9Q8NDG6 1382 aaKnown RBP6.54□□□□□ -1.36
UBR4-209ENST00000465036 XDHP47989 1333 aa6.53□□□□□ -1.36
UBR4-209ENST00000465036 EIF4G3O43432 1585 aaKnown RBP6.53□□□□□ -1.36
UBR4-209ENST00000465036 SOGA1O94964 1423 aa6.53□□□□□ -1.36
UBR4-209ENST00000465036 PTGS2P35354 604 aa6.53□□□□□ -1.36
UBR4-209ENST00000465036 SMAD3P84022 425 aaKnown RBP6.53□□□□□ -1.36
UBR4-209ENST00000465036 RBL2Q08999 1139 aa6.53□□□□□ -1.36
UBR4-209ENST00000465036 ABHD17CQ6PCB6 329 aa6.53□□□□□ -1.36
UBR4-209ENST00000465036 GAREM2Q75VX8 874 aa6.53□□□□□ -1.36
UBR4-209ENST00000465036 ZSWIM2Q8NEG5 633 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms