RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 TRIM59Q8IWR1 403 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 HIPK4Q8NE63 616 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 PHF20Q9BVI0 1012 aa16.92■□□□□ 0.3
SMC4-204ENST00000462787 CYP2D7A0A087X1C5 515 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 TOM1O60784 492 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 KIF2BQ8N4N8 673 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 DLGAP2Q9P1A6 1054 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 ZFATQ9P243 1243 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 PAIP2BQ9ULR5 123 aaKnown RBP16.91■□□□□ 0.3
SMC4-204ENST00000462787 WDR17Q8IZU2 1322 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 A2ML1A8K2U0 1454 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 EEF1DP29692 281 aaKnown RBP16.91■□□□□ 0.3
SMC4-204ENST00000462787 RABL6Q3YEC7 729 aaPredicted RBP16.91■□□□□ 0.3
SMC4-204ENST00000462787 DAB2IPQ5VWQ8 1189 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 TMC4Q7Z404 712 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 CCDC125Q86Z20 511 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 GIMAP8Q8ND71 665 aaPredicted RBP16.91■□□□□ 0.3
SMC4-204ENST00000462787 CASKIN2Q8WXE0 1202 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 SYN2Q92777 582 aaPredicted RBP16.91■□□□□ 0.3
SMC4-204ENST00000462787 ERP27Q96DN0 273 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 C7orf25Q9BPX7 421 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 TRIM51Q9BSJ1 452 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 CNOT8Q9UFF9 292 aaKnown RBP16.91■□□□□ 0.3
SMC4-204ENST00000462787 GSTA2P09210 222 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 STX1BP61266 288 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 CDK17Q00537 523 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 MED21Q13503 144 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 PDZD4Q76G19 769 aaPredicted RBP16.91■□□□□ 0.3
SMC4-204ENST00000462787 NLRX1Q86UT6 975 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 RASSF3Q86WH2 238 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 TRIM50Q86XT4 487 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 COA7Q96BR5 231 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 ANAPC7Q9UJX3 599 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 MEIS1O00470 390 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 SNUPNO95149 360 aaKnown RBP16.91■□□□□ 0.3
SMC4-204ENST00000462787 VHLP40337 213 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 MRPS9P82933 396 aaKnown RBP16.91■□□□□ 0.3
SMC4-204ENST00000462787 FRMD5Q7Z6J6 570 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 IGDCC4Q8TDY8 1250 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 ZBTB10Q96DT7 871 aa16.91■□□□□ 0.3
SMC4-204ENST00000462787 HEG1Q9ULI3 1381 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 SKOR1P84550 965 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 KNOP1Q1ED39 458 aaKnown RBP16.9■□□□□ 0.3
SMC4-204ENST00000462787 TBC1D9BQ66K14 1250 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 SLFN13Q68D06 897 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 TTLL11Q8NHH1 800 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
SMC4-204ENST00000462787 PP2D1A8MPX8 630 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 KRT38O76015 456 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 TBX2Q13207 712 aaPredicted RBP16.9■□□□□ 0.3
SMC4-204ENST00000462787 USP49Q70CQ1 688 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 CATSPER1Q8NEC5 780 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 ZNF564Q8TBZ8 553 aaPredicted RBP16.9■□□□□ 0.3
SMC4-204ENST00000462787 SMYD3Q9H7B4 428 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
SMC4-204ENST00000462787 TTC36A6NLP5 189 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 ORC4O43929 436 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 ATP6V1G2O95670 118 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 DRAP1Q14919 205 aaPredicted RBP16.9■□□□□ 0.3
SMC4-204ENST00000462787 NLRP10Q86W26 655 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 CDCA7Q9BWT1 371 aaPredicted RBP16.9■□□□□ 0.3
SMC4-204ENST00000462787 ANKFY1Q9P2R3 1169 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 NRKQ7Z2Y5 1582 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 NEO1Q92859 1461 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 ZFYVE16Q7Z3T8 1539 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 MCF2P10911 925 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 USP11P51784 963 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 TMCO4Q5TGY1 634 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 C16orf87Q6PH81 154 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 DARS2Q6PI48 645 aaKnown RBP16.9■□□□□ 0.3
SMC4-204ENST00000462787 LRRC34Q8IZ02 419 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 CCDC138Q96M89 665 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 FAM129AQ9BZQ8 928 aa16.9■□□□□ 0.3
SMC4-204ENST00000462787 CFLARO15519 480 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 TTLL1O95922 423 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 ZNF18P17022 549 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 MFSD14BQ5SR56 506 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 JADE1Q6IE81 842 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 ANKS1AQ92625 1134 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 PCIF1Q9H4Z3 704 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 PLAGL2Q9UPG8 496 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 TNNC2P02585 160 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 USP17L2Q6R6M4 530 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 ARHGAP27Q6ZUM4 889 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 YTHDF3Q7Z739 585 aaKnown RBP16.89■□□□□ 0.29
SMC4-204ENST00000462787 ERP44Q9BS26 406 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 TRABDQ9H4I3 376 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 TMEM120BA0PK00 339 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 ITIH2P19823 946 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 SOX5P35711 763 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 STAT2P52630 851 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 ANTXR2P58335 489 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 DNAL1Q4LDG9 190 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 TTC13Q8NBP0 860 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 CCDC17Q96LX7 622 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 WWP1Q9H0M0 922 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 PPCSQ9HAB8 311 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 MRPL40Q9NQ50 206 aaKnown RBP16.89■□□□□ 0.29
SMC4-204ENST00000462787 MAGEA13PA6NCF6 341 aa16.89■□□□□ 0.29
SMC4-204ENST00000462787 FAM47DPA6NHR8 397 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms