RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 TBKBP1A7MCY6 615 aa20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 PI4K2BG5E9Z4 385 aa20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 CSPG5O95196 566 aa20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 NEFLP07196 543 aa20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 FDPSP14324 419 aaKnown RBP20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 DARSP14868 501 aaKnown RBP20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 TMOD1P28289 359 aa20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 ADAM15Q13444 863 aa20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 XKR3Q5GH77 459 aa20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 EARS2Q5JPH6 523 aaKnown RBP20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 GJD3Q8N144 294 aa20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 POF1BQ8WVV4 589 aa20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 TYW1Q9NV66 732 aaKnown RBP20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 PCDHGC5Q9Y5F6 944 aa20.84■□□□□ 0.93
UBE2D4-208ENST00000454350 AK2P54819 239 aa20.83■□□□□ 0.93
UBE2D4-208ENST00000454350 TBC1D8BQ0IIM8 1120 aa20.83■□□□□ 0.93
UBE2D4-208ENST00000454350 PPP4R3AQ6IN85 833 aa20.83■□□□□ 0.93
UBE2D4-208ENST00000454350 LRRC55Q6ZSA7 311 aa20.83■□□□□ 0.93
UBE2D4-208ENST00000454350 EP400NLQ6ZTU2 488 aa20.83■□□□□ 0.93
UBE2D4-208ENST00000454350 ANO5Q75V66 913 aa20.83■□□□□ 0.93
UBE2D4-208ENST00000454350 CASD1Q96PB1 797 aa20.83■□□□□ 0.93
UBE2D4-208ENST00000454350 SH2D3AQ9BRG2 576 aa20.83■□□□□ 0.93
UBE2D4-208ENST00000454350 ATP6V0A4Q9HBG4 840 aa20.83■□□□□ 0.93
UBE2D4-208ENST00000454350 SEPT9Q9UHD8 586 aaPredicted RBP20.83■□□□□ 0.93
UBE2D4-208ENST00000454350 C19orf67A6NJJ6 358 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 CDKL5O76039 1030 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 LARGE1O95461 756 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 FGFR4P22455 802 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 ZP2Q05996 745 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 PPP2R5CQ13362 524 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 LETM2Q2VYF4 491 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 MTERF2Q49AM1 385 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 ECHDC2Q86YB7 292 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 COLGALT1Q8NBJ5 622 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 HAS1Q92839 578 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 MSLNLQ96KJ4 702 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 LRFN3Q9BTN0 628 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 IGFLR1Q9H665 355 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 RNF216Q9NWF9 866 aaPredicted RBP20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 WRAP73Q9P2S5 460 aaPredicted RBP20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 TRIOO75962 3097 aa20.82■□□□□ 0.92
UBE2D4-208ENST00000454350 FAM205CA6NFA0 338 aa20.81■□□□□ 0.92
UBE2D4-208ENST00000454350 MBTPS2O43462 519 aa20.81■□□□□ 0.92
UBE2D4-208ENST00000454350 CSDE1O75534 798 aaKnown RBP20.81■□□□□ 0.92
UBE2D4-208ENST00000454350 GLP2RO95838 553 aa20.81■□□□□ 0.92
UBE2D4-208ENST00000454350 ATF7P17544 494 aaPredicted RBP20.81■□□□□ 0.92
UBE2D4-208ENST00000454350 NEK8Q86SG6 692 aa20.81■□□□□ 0.92
UBE2D4-208ENST00000454350 ZNF598Q86UK7 904 aaKnown RBP20.81■□□□□ 0.92
UBE2D4-208ENST00000454350 TNFRSF25Q93038 417 aa20.81■□□□□ 0.92
UBE2D4-208ENST00000454350 FAM20AQ96MK3 541 aa20.81■□□□□ 0.92
UBE2D4-208ENST00000454350 CLEC1BQ9P126 229 aa20.81■□□□□ 0.92
UBE2D4-208ENST00000454350 MAFO75444 373 aaPredicted RBP20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 FGF18O76093 207 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 PSMC5P62195 406 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 UBE3AQ05086 875 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 SMAD2Q15796 467 aaKnown RBP20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 CLUL1Q15846 466 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 ME3Q16798 604 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 CLLU1OSQ5K130 101 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 PIK3AP1Q6ZUJ8 805 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 EFHBQ8N7U6 833 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 NECAB1Q8N987 351 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 ZNF579Q8NAF0 562 aaKnown RBP20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 TMEM117Q9H0C3 514 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 ORC3Q9UBD5 711 aaPredicted RBP20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 PRKAG3Q9UGI9 489 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 PCDHB12Q9Y5F1 795 aa20.8■□□□□ 0.92
UBE2D4-208ENST00000454350 A0A0U1RQF3 1178 aa20.79■□□□□ 0.92
UBE2D4-208ENST00000454350 CCDC194A0A1B0GVG4 234 aa20.79■□□□□ 0.92
UBE2D4-208ENST00000454350 DDX11L8A8MPP1 907 aa20.79■□□□□ 0.92
UBE2D4-208ENST00000454350 FSCN2O14926 492 aa20.79■□□□□ 0.92
UBE2D4-208ENST00000454350 GPR37L1O60883 481 aa20.79■□□□□ 0.92
UBE2D4-208ENST00000454350 GCFC2P16383 781 aaKnown RBP20.79■□□□□ 0.92
UBE2D4-208ENST00000454350 ERVFC1P60507 584 aa20.79■□□□□ 0.92
UBE2D4-208ENST00000454350 SPIRE1Q08AE8 756 aa20.79■□□□□ 0.92
UBE2D4-208ENST00000454350 ERICH6BQ5W0A0 696 aa20.79■□□□□ 0.92
UBE2D4-208ENST00000454350 PLA2G4FQ68DD2 849 aa20.79■□□□□ 0.92
UBE2D4-208ENST00000454350 A0A087WZ62 844 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 TBX3O15119 743 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 EYA4O95677 639 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 ZSCAN20P17040 1043 aaPredicted RBP20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 QARSP47897 775 aaKnown RBP20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 NRIP1P48552 1158 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 NPEPPSP55786 919 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 NR5A1Q13285 461 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 SMAD4Q13485 552 aaKnown RBP20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 ANKRD1Q15327 319 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 SPOUT1Q5T280 376 aaKnown RBP20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 KSR1Q8IVT5 923 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 ADHFE1Q8IWW8 467 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 VN1R2Q8NFZ6 395 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 NLRP7Q8WX94 980 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 GTF3C6Q969F1 213 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 FDXACB1Q9BRP7 624 aaPredicted RBP20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 AAASQ9NRG9 546 aa20.78■□□□□ 0.92
UBE2D4-208ENST00000454350 CCNT1O60563 726 aaKnown RBP20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 SEC24BO95487 1268 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 LAG3P18627 525 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 PLCB3Q01970 1234 aa20.77■□□□□ 0.92
UBE2D4-208ENST00000454350 ST3GAL1Q11201 340 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms