RNA–Protein interactions for RNA: ENST00000439211.6

DHFR-201, Transcript of dihydrofolate reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-201ENST00000439211 GUF1Q8N442 669 aaKnown RBP17.04■□□□□ 0.32
DHFR-201ENST00000439211 IQCDQ96DY2 449 aa17.04■□□□□ 0.32
DHFR-201ENST00000439211 BLOC1S6Q9UL45 172 aa17.04■□□□□ 0.32
DHFR-201ENST00000439211 ADAMTS7Q9UKP4 1686 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 MYH8P13535 1937 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 USP17L15C9J2P7 530 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 USP17L13C9JLJ4 530 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 USP17L11C9JVI0 530 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 USP17L18D6R9N7 530 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 USP17L22D6RA61 530 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 USP17L17D6RBQ6 530 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 USP17L19D6RCP7 530 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 USP17L20D6RJB6 530 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 KCNA3P22001 575 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 NR2F2P24468 414 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 USP17L24Q0WX57 530 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 PRR16Q569H4 304 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 C1QTNF12Q5T7M4 302 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 USP17L6PQ6QN14 398 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 RAD54LQ92698 747 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 NDNQ99608 321 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 SPZ1Q9BXG8 430 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 NPHP3-ACAD11A0A0J9YXS1 232 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 NKRFO15226 690 aaKnown RBP eCLIP17.03■□□□□ 0.326e-9■□□□□ 11.2
DHFR-201ENST00000439211 FGRP09769 529 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 GRB10Q13322 594 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 ADAT2Q7Z6V5 191 aaKnown RBP17.03■□□□□ 0.32
DHFR-201ENST00000439211 GBP7Q8N8V2 638 aaPredicted RBP17.03■□□□□ 0.32
DHFR-201ENST00000439211 NEDD1Q8NHV4 660 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 KIFAP3Q92845 792 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 NUDT12Q9BQG2 462 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 RAB17Q9H0T7 212 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 GOLPH3Q9H4A6 298 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 CHMP2BQ9UQN3 213 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 TJP1Q07157 1748 aa17.03■□□□□ 0.32
DHFR-201ENST00000439211 SLCO1A2P46721 670 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 PLS1Q14651 629 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 MEA1Q16626 185 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 TTBK2Q6IQ55 1244 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 RBM12BQ8IXT5 1001 aaKnown RBP17.02■□□□□ 0.32
DHFR-201ENST00000439211 HIC2Q96JB3 615 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 ZC3H12CQ9C0D7 883 aaKnown RBP17.02■□□□□ 0.32
DHFR-201ENST00000439211 ARHGEF10LQ9HCE6 1279 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 CD209Q9NNX6 404 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 RIC8AQ9NPQ8 531 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 CTTNBP2NLQ9P2B4 639 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 LAMB4A4D0S4 1761 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 PVALEFA0A1B0GWK0 134 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 DRD4P21917 467 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 COASYQ13057 564 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 KCTD19Q17RG1 926 aaPredicted RBP17.02■□□□□ 0.32
DHFR-201ENST00000439211 ARHGEF1Q92888 912 aaKnown RBP17.02■□□□□ 0.32
DHFR-201ENST00000439211 L3MBTL3Q96JM7 780 aaPredicted RBP17.02■□□□□ 0.32
DHFR-201ENST00000439211 PRMT1Q99873 361 aaKnown RBP17.02■□□□□ 0.32
DHFR-201ENST00000439211 TSKSQ9UJT2 592 aa17.02■□□□□ 0.32
DHFR-201ENST00000439211 CHMP2AO43633 222 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 PDE6CP51160 858 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 KSR1Q8IVT5 923 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 EMILIN3Q9NT22 766 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 ARMCX3Q9UH62 379 aaPredicted RBP17.02■□□□□ 0.31
DHFR-201ENST00000439211 MYH7P12883 1935 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 BAZ2AQ9UIF9 1905 aaKnown RBP17.02■□□□□ 0.31
DHFR-201ENST00000439211 POTEB3A0JP26 581 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 SRRM3A6NNA2 597 aaPredicted RBP17.02■□□□□ 0.31
DHFR-201ENST00000439211 POTECB2RU33 542 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 KRT16P08779 473 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 MIIPQ5JXC2 388 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 OLFML2BQ68BL8 750 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 POTEBQ6S5H4 581 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 DNAAF5Q86Y56 855 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 ERMNQ8TAM6 284 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 CNKSR1Q969H4 720 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 ZNF711Q9Y462 761 aa17.02■□□□□ 0.31
DHFR-201ENST00000439211 BZW2Q9Y6E2 419 aaKnown RBP17.02■□□□□ 0.31
DHFR-201ENST00000439211 SNAP25P60880 206 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 COPS2P61201 443 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 GRAPQ13588 217 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 TRADDQ15628 312 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 GRAPLQ8TC17 118 aaPredicted RBP17.01■□□□□ 0.31
DHFR-201ENST00000439211 DYDC2Q96IM9 177 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 AP1M1Q9BXS5 423 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 UBE2OQ9C0C9 1292 aaKnown RBP17.01■□□□□ 0.31
DHFR-201ENST00000439211 NT5C3AQ9H0P0 336 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 USP40Q9NVE5 1235 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 PCDHA1Q9Y5I3 950 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 ZNF263O14978 683 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 ABL2P42684 1182 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 LRRC14Q15048 493 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 CENPPQ6IPU0 288 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 PDXDC1Q6P996 788 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 PREBQ9HCU5 417 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 MLXIPLQ9NP71 852 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 WDR35Q9P2L0 1181 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 KDM4FA0A1W2PPD8 638 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 GCNT3O95395 438 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 SERPING1P05155 500 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 PLA2G4BP0C869 781 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 ABCB4P21439 1286 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 STAT3P40763 770 aa17.01■□□□□ 0.31
DHFR-201ENST00000439211 DENND2CQ68D51 928 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms