RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 VWCEQ96DN2 955 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 ZBTB10Q96DT7 871 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 NFKBIZQ9BYH8 718 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 INO80BQ9C086 356 aaPredicted RBP16.61■□□□□ 0.25
GARNL3-204ENST00000429629 LRRC27Q9C0I9 530 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 PRO3102Q9H379 93 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 MAGEF1Q9HAY2 307 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 USP25Q9UHP3 1055 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 AKT3Q9Y243 479 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 CDY2AQ9Y6F7 541 aa16.61■□□□□ 0.25
GARNL3-204ENST00000429629 A0A087WWV3 80 aa16.6■□□□□ 0.25
GARNL3-204ENST00000429629 NBNO60934 754 aa16.6■□□□□ 0.25
GARNL3-204ENST00000429629 EFCAB14O75071 495 aa16.6■□□□□ 0.25
GARNL3-204ENST00000429629 SCP2P22307 547 aa16.6■□□□□ 0.25
GARNL3-204ENST00000429629 EIF4BP23588 611 aaKnown RBP16.6■□□□□ 0.25
GARNL3-204ENST00000429629 NLRP11P59045 1033 aaKnown RBP16.6■□□□□ 0.25
GARNL3-204ENST00000429629 DRP2Q13474 957 aa16.6■□□□□ 0.25
GARNL3-204ENST00000429629 ZRSR1Q15695 479 aaKnown RBP16.6■□□□□ 0.25
GARNL3-204ENST00000429629 NAALADL2Q58DX5 795 aa16.6■□□□□ 0.25
GARNL3-204ENST00000429629 PLEKHG4Q58EX7 1191 aa16.6■□□□□ 0.25
GARNL3-204ENST00000429629 FBXO47Q5MNV8 452 aa16.6■□□□□ 0.25
GARNL3-204ENST00000429629 PSRC1Q6PGN9 363 aaPredicted RBP16.6■□□□□ 0.25
GARNL3-204ENST00000429629 LARP4BQ92615 738 aaKnown RBP16.6■□□□□ 0.25
GARNL3-204ENST00000429629 NTPCRQ9BSD7 190 aaKnown RBP16.6■□□□□ 0.25
GARNL3-204ENST00000429629 HPSEQ9Y251 543 aa16.6■□□□□ 0.25
GARNL3-204ENST00000429629 COL4A3BPQ9Y5P4 624 aa16.6■□□□□ 0.25
GARNL3-204ENST00000429629 TNRC18O15417 2968 aaPredicted RBP16.6■□□□□ 0.25
GARNL3-204ENST00000429629 A0A1W2PPC1 479 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 USO1O60763 962 aaKnown RBP16.59■□□□□ 0.25
GARNL3-204ENST00000429629 VTNP04004 478 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 LAMTOR4Q0VGL1 99 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 TFDP1Q14186 410 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 PPP2R5AQ15172 486 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 E2F4Q16254 413 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 TSHZ1Q6ZSZ6 1077 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 SV2BQ7L1I2 683 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 C16orf59Q7L2K0 433 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 KCNN1Q92952 543 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 TMEM143Q96AN5 459 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 SCLYQ96I15 445 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 DRC1Q96MC2 740 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 GCOM2Q9BZD3 368 aaPredicted RBP16.59■□□□□ 0.25
GARNL3-204ENST00000429629 BMP2KQ9NSY1 1161 aaPredicted RBP16.59■□□□□ 0.25
GARNL3-204ENST00000429629 KCNH3Q9ULD8 1083 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 ODF2LQ9ULJ1 636 aa16.59■□□□□ 0.25
GARNL3-204ENST00000429629 ABHD14A-ACY1A0A1B0GW23 586 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 GPR182O15218 404 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 BAIAP3O94812 1187 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 FGBP02675 491 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 ACTN1P12814 892 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 DARSP14868 501 aaKnown RBP16.58■□□□□ 0.24
GARNL3-204ENST00000429629 STAT6P42226 847 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 MDM2Q00987 491 aaPredicted RBP16.58■□□□□ 0.24
GARNL3-204ENST00000429629 AMPD3Q01432 767 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 LPIN1Q14693 890 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 KIZQ2M2Z5 673 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 ARSHQ5FYA8 562 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 TMEM240Q5SV17 173 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 CNNM4Q6P4Q7 775 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 CNKSR3Q6P9H4 555 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 SRGAP1Q7Z6B7 1085 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 RHPN2Q8IUC4 686 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 SEPT8Q92599 483 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 CHAMP1Q96JM3 812 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 PLIN2Q99541 437 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 FTHL17Q9BXU8 183 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 TNMDQ9H2S6 317 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 IFT122Q9HBG6 1241 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 KBTBD4Q9NVX7 518 aa16.58■□□□□ 0.24
GARNL3-204ENST00000429629 PHLPP2Q6ZVD8 1323 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 A0A087X0B3 334 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 CTSHP09668 335 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 GLRA2P23416 452 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 PTENP60484 403 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 FAM102BQ5T8I3 360 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 RASIP1Q5U651 963 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 LRRC15Q8TF66 581 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 HERVK_113Q902F9 699 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 MRPS27Q92552 414 aaKnown RBP16.57■□□□□ 0.24
GARNL3-204ENST00000429629 RUSC1Q9BVN2 902 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 UBE2OQ9C0C9 1292 aaKnown RBP16.57■□□□□ 0.24
GARNL3-204ENST00000429629 MTIF3Q9H2K0 278 aaKnown RBP16.57■□□□□ 0.24
GARNL3-204ENST00000429629 CDHR5Q9HBB8 845 aa16.57■□□□□ 0.24
GARNL3-204ENST00000429629 GOLGA6L4A6NEF3 574 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 POLR2DO15514 142 aaKnown RBP16.56■□□□□ 0.24
GARNL3-204ENST00000429629 RPS6KA5O75582 802 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 SLFN14P0C7P3 912 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 NAMPTP43490 491 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 PHKA2P46019 1235 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 ZNF131P52739 623 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 EPHB4P54760 987 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 TMEM62Q0P6H9 643 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 IKBKEQ14164 716 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 MCM6Q14566 821 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 DBF4BQ8NFT6 615 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 SPIRE2Q8WWL2 714 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 NLRP7Q8WX94 980 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 IFT74Q96LB3 600 aa16.56■□□□□ 0.24
GARNL3-204ENST00000429629 IFIH1Q9BYX4 1025 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms