RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 CEP89Q96ST8 783 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 GDF15Q99988 308 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 OSBPL7Q9BZF2 842 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 GPRC5CQ9NQ84 441 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 FAM13BQ9NYF5 915 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 PPME1Q9Y570 386 aa16.19■□□□□ 0.18
SGCE-204ENST00000428696 GOLGA6L4A6NEF3 574 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 PARNO95453 639 aaKnown RBP16.18■□□□□ 0.18
SGCE-204ENST00000428696 KRT18P05783 430 aaKnown RBP16.18■□□□□ 0.18
SGCE-204ENST00000428696 ACTN1P12814 892 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 STAT6P42226 847 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 RBL2Q08999 1139 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 MBTPS1Q14703 1052 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 SHHQ15465 462 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 FAM26DQ5JW98 314 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 TRAF7Q6Q0C0 670 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 C16orf59Q7L2K0 433 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 SEPT8Q92599 483 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.18■□□□□ 0.18
SGCE-204ENST00000428696 CCSER1Q9C0I3 900 aa16.18■□□□□ 0.18
SGCE-204ENST00000428696 POLR3FQ9H1D9 316 aaPredicted RBP16.18■□□□□ 0.18
SGCE-204ENST00000428696 A0A087WZ62 844 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.17■□□□□ 0.18
SGCE-204ENST00000428696 IGKV6-21A0A0C4DH24 114 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 CSDE1O75534 798 aaKnown RBP16.17■□□□□ 0.18
SGCE-204ENST00000428696 CYP11B2P19099 503 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 CD52P31358 61 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 CRYBB1P53674 252 aaPredicted RBP16.17■□□□□ 0.18
SGCE-204ENST00000428696 MGAT3Q09327 533 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 LAMTOR4Q0VGL1 99 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 MCM6Q14566 821 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 LPIN1Q14693 890 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 TMEM119Q4V9L6 283 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 TMEM240Q5SV17 173 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 C9orf50Q5SZB4 431 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 HYIQ5T013 277 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 PSRC1Q6PGN9 363 aaPredicted RBP16.17■□□□□ 0.18
SGCE-204ENST00000428696 SHC4Q6S5L8 630 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 CCDC73Q6ZRK6 1079 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 MCPH1Q8NEM0 835 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 DBF4BQ8NFT6 615 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 RNPC3Q96LT9 517 aaKnown RBP16.17■□□□□ 0.18
SGCE-204ENST00000428696 FDXACB1Q9BRP7 624 aaPredicted RBP16.17■□□□□ 0.18
SGCE-204ENST00000428696 IFIH1Q9BYX4 1025 aaKnown RBP16.17■□□□□ 0.18
SGCE-204ENST00000428696 ZHX3Q9H4I2 956 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 COL4A3BPQ9Y5P4 624 aa16.17■□□□□ 0.18
SGCE-204ENST00000428696 GAS2O43903 313 aaKnown RBP16.16■□□□□ 0.18
SGCE-204ENST00000428696 GPR32O75388 356 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 RPS6KA5O75582 802 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 FGFR4P22455 802 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 GPC3P51654 580 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 CDC42EP1Q00587 391 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 PAK2Q13177 524 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 IKBKEQ14164 716 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 GPNMBQ14956 572 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 FBXO47Q5MNV8 452 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 LINC01465Q8N7H1 131 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 RNF149Q8NC42 400 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 DHX58Q96C10 678 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 GCOM2Q9BZD3 368 aaPredicted RBP16.16■□□□□ 0.18
SGCE-204ENST00000428696 XPNPEP1Q9NQW7 623 aa16.16■□□□□ 0.18
SGCE-204ENST00000428696 NPHP3-ACAD11A0A0J9YXS1 232 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 LRRIQ4A6NIV6 560 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 SFI1A8K8P3 1242 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 ASAP2O43150 1006 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 SLC26A4O43511 780 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 PFKMP08237 780 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 LIG1P18858 919 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 TFDP1Q14186 410 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 MXD4Q14582 209 aaPredicted RBP16.15■□□□□ 0.18
SGCE-204ENST00000428696 RINT1Q6NUQ1 792 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 GPBP1Q86WP2 473 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 SYT2Q8N9I0 419 aaPredicted RBP16.15■□□□□ 0.18
SGCE-204ENST00000428696 RAD54LQ92698 747 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 RUSC1Q9BVN2 902 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 MTIF3Q9H2K0 278 aaKnown RBP16.15■□□□□ 0.18
SGCE-204ENST00000428696 ADAMTS10Q9H324 1103 aa16.15■□□□□ 0.18
SGCE-204ENST00000428696 AGO3Q9H9G7 860 aaKnown RBP16.15■□□□□ 0.18
SGCE-204ENST00000428696 NOC2LQ9Y3T9 749 aaKnown RBP16.15■□□□□ 0.18
SGCE-204ENST00000428696 MORC2Q9Y6X9 1032 aaPredicted RBP16.15■□□□□ 0.18
SGCE-204ENST00000428696 GPR182O15218 404 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 POLR2DO15514 142 aaKnown RBP16.14■□□□□ 0.17
SGCE-204ENST00000428696 BMP8BP34820 402 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 SLC12A3P55017 1021 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 AXDND1Q5T1B0 1012 aaPredicted RBP16.14■□□□□ 0.17
SGCE-204ENST00000428696 CNKSR3Q6P9H4 555 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 TSHZ1Q6ZSZ6 1077 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 SV2BQ7L1I2 683 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 KCTD17Q8N5Z5 321 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 USP38Q8NB14 1042 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 ASAP3Q8TDY4 903 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 TMEM40Q8WWA1 233 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 IFT74Q96LB3 600 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 PADI3Q9ULW8 664 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 ST3GAL5Q9UNP4 418 aa16.14■□□□□ 0.17
SGCE-204ENST00000428696 A0A087X0B3 334 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 A0A1B0GVL5 298 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 CCDC169A6NNP5 214 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 HIP1RO75146 1068 aa16.13■□□□□ 0.17
SGCE-204ENST00000428696 CXCL10P02778 98 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms