RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PRMT2P55345 433 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 GJA9P57773 515 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 IQCB1Q15051 598 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 FAM102BQ5T8I3 360 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 MYCT1Q8N699 235 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 FAM167AQ96KS9 214 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 FIZ1Q96SL8 496 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 DHX33Q9H6R0 707 aaKnown RBP17.15■□□□□ 0.34
SHMT2-202ENST00000414700 PARVGQ9HBI0 331 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 ODF2LQ9ULJ1 636 aa17.15■□□□□ 0.34
SHMT2-202ENST00000414700 ADAMTS4O75173 837 aa17.14■□□□□ 0.34
SHMT2-202ENST00000414700 F2P00734 622 aa17.14■□□□□ 0.34
SHMT2-202ENST00000414700 MYCP01106 439 aaPredicted RBP17.14■□□□□ 0.34
SHMT2-202ENST00000414700 INSRRP14616 1297 aa17.14■□□□□ 0.34
SHMT2-202ENST00000414700 POLGP54098 1239 aaPredicted RBP17.14■□□□□ 0.34
SHMT2-202ENST00000414700 IGBP1P78318 339 aa17.14■□□□□ 0.34
SHMT2-202ENST00000414700 DRP2Q13474 957 aa17.14■□□□□ 0.34
SHMT2-202ENST00000414700 EMC2Q15006 297 aa17.14■□□□□ 0.34
SHMT2-202ENST00000414700 GNASQ5JWF2 1037 aa17.14■□□□□ 0.34
SHMT2-202ENST00000414700 DHX40Q8IX18 779 aaKnown RBP17.14■□□□□ 0.34
SHMT2-202ENST00000414700 AOPEPQ8N6M6 819 aa17.14■□□□□ 0.34
SHMT2-202ENST00000414700 CCDC47Q96A33 483 aaKnown RBP17.14■□□□□ 0.34
SHMT2-202ENST00000414700 XPNPEP3Q9NQH7 507 aa17.14■□□□□ 0.34
SHMT2-202ENST00000414700 CGNQ9P2M7 1197 aaKnown RBP17.14■□□□□ 0.34
SHMT2-202ENST00000414700 COL4A3BPQ9Y5P4 624 aa17.14■□□□□ 0.34
SHMT2-202ENST00000414700 HBP1O60381 514 aa17.14■□□□□ 0.33
SHMT2-202ENST00000414700 MYCNP04198 464 aaPredicted RBP17.14■□□□□ 0.33
SHMT2-202ENST00000414700 MYL3P08590 195 aa17.14■□□□□ 0.33
SHMT2-202ENST00000414700 STX17P56962 302 aa17.14■□□□□ 0.33
SHMT2-202ENST00000414700 ADSSL1Q8N142 457 aa17.14■□□□□ 0.33
SHMT2-202ENST00000414700 BSNDQ8WZ55 320 aa17.14■□□□□ 0.33
SHMT2-202ENST00000414700 TMEM143Q96AN5 459 aa17.14■□□□□ 0.33
SHMT2-202ENST00000414700 ATP6V0A4Q9HBG4 840 aa17.14■□□□□ 0.33
SHMT2-202ENST00000414700 ZNF215Q9UL58 517 aaPredicted RBP17.14■□□□□ 0.33
SHMT2-202ENST00000414700 FRMPD3Q5JV73 1810 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 SMTNL1A8MU46 457 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 HSPA8P11142 646 aaKnown RBP17.13■□□□□ 0.33
SHMT2-202ENST00000414700 NMT1P30419 496 aaKnown RBP17.13■□□□□ 0.33
SHMT2-202ENST00000414700 PMS1P54277 932 aaKnown RBP17.13■□□□□ 0.33
SHMT2-202ENST00000414700 PURAQ00577 322 aaKnown RBP17.13■□□□□ 0.33
SHMT2-202ENST00000414700 KIAA0753Q2KHM9 967 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 ODR4Q5SWX8 454 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 UPF3AQ9H1J1 476 aaKnown RBP17.13■□□□□ 0.33
SHMT2-202ENST00000414700 DDX20Q9UHI6 824 aaKnown RBP17.13■□□□□ 0.33
SHMT2-202ENST00000414700 CTNND2Q9UQB3 1225 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 TRIM49BA6NDI0 452 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 MAFO75444 373 aaPredicted RBP17.13■□□□□ 0.33
SHMT2-202ENST00000414700 MYBP10242 640 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 KCNA1Q09470 495 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 TBC1D8BQ0IIM8 1120 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 PSMD2Q13200 908 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 NCAPHQ15003 741 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 LRRC71Q8N4P6 559 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 SLC7A3Q8WY07 619 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
SHMT2-202ENST00000414700 MRPL44Q9H9J2 332 aaKnown RBP17.13■□□□□ 0.33
SHMT2-202ENST00000414700 OLFML3Q9NRN5 406 aa17.13■□□□□ 0.33
SHMT2-202ENST00000414700 SCN10AQ9Y5Y9 1956 aa17.12■□□□□ 0.33
SHMT2-202ENST00000414700 AP5Z1O43299 807 aa17.12■□□□□ 0.33
SHMT2-202ENST00000414700 LBX1P52954 281 aa17.12■□□□□ 0.33
SHMT2-202ENST00000414700 PEX3P56589 373 aa17.12■□□□□ 0.33
SHMT2-202ENST00000414700 MKRN4PQ13434 485 aaPredicted RBP17.12■□□□□ 0.33
SHMT2-202ENST00000414700 ZC2HC1CQ53FD0 456 aaPredicted RBP17.12■□□□□ 0.33
SHMT2-202ENST00000414700 BRDTQ58F21 947 aaPredicted RBP17.12■□□□□ 0.33
SHMT2-202ENST00000414700 CXCL17Q6UXB2 119 aa17.12■□□□□ 0.33
SHMT2-202ENST00000414700 KSR1Q8IVT5 923 aa17.12■□□□□ 0.33
SHMT2-202ENST00000414700 SCFD1Q8WVM8 642 aa17.12■□□□□ 0.33
SHMT2-202ENST00000414700 KIFC3Q9BVG8 833 aa17.12■□□□□ 0.33
SHMT2-202ENST00000414700 SUGCTQ9HAC7 445 aa17.12■□□□□ 0.33
SHMT2-202ENST00000414700 HMX1Q9NP08 348 aaPredicted RBP17.12■□□□□ 0.33
SHMT2-202ENST00000414700 GAP43P17677 238 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 PLCB2Q00722 1185 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 HIC1Q14526 733 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 LHX8Q68G74 356 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 FAM178BQ8IXR5 827 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 MCPH1Q8NEM0 835 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 DRC1Q96MC2 740 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 BPIFA3Q9BQP9 254 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 POLR3FQ9H1D9 316 aaPredicted RBP17.11■□□□□ 0.33
SHMT2-202ENST00000414700 IKZF4Q9H2S9 585 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 GCNT3O95395 438 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 CAVIN2O95810 425 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 GJB1P08034 283 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 PLS3P13797 630 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 HOXD13P35453 343 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 PPFIA1Q13136 1202 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 MFSD10Q14728 455 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 MTFR1Q15390 333 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 MARCH8Q5T0T0 291 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 NELFCDQ8IXH7 590 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 NELFBQ8WX92 580 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 HSD3B7Q9H2F3 369 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 SPC25Q9HBM1 224 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 SETD4Q9NVD3 440 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 LARSQ9P2J5 1176 aaKnown RBP17.11■□□□□ 0.33
SHMT2-202ENST00000414700 DACH1Q9UI36 760 aa17.11■□□□□ 0.33
SHMT2-202ENST00000414700 ADGRA3Q8IWK6 1321 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 IGKV6-21A0A0C4DH24 114 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 CCDC66A2RUB6 948 aa17.1■□□□□ 0.33
SHMT2-202ENST00000414700 HAS3O00219 553 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms