RNA–Protein interactions for RNA: ENST00000414416.2

LINC00116-201, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene LINC00116, Length 2,051 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-201ENST00000414416 PTPN11Q06124 597 aaPredicted RBP17.03■□□□□ 0.32
LINC00116-201ENST00000414416 FAM102BQ5T8I3 360 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 ISM2Q6H9L7 571 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 EFCAB12Q6NXP0 572 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 METTL13Q8N6R0 699 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 DIS3LQ8TF46 1054 aaKnown RBP17.03■□□□□ 0.32
LINC00116-201ENST00000414416 DNAJC19Q96DA6 116 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 ODF2LQ9ULJ1 636 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 KIAA0100Q14667 2235 aaKnown RBP17.03■□□□□ 0.32
LINC00116-201ENST00000414416 MBLAC1A4D2B0 266 aaPredicted RBP17.03■□□□□ 0.32
LINC00116-201ENST00000414416 TBCAO75347 108 aaKnown RBP17.03■□□□□ 0.32
LINC00116-201ENST00000414416 IDEP14735 1019 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 SOX10P56693 466 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 ZNF200P98182 395 aaPredicted RBP17.03■□□□□ 0.32
LINC00116-201ENST00000414416 GDF6Q6KF10 455 aaPredicted RBP17.03■□□□□ 0.32
LINC00116-201ENST00000414416 LRRC71Q8N4P6 559 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 SLC43A3Q8NBI5 491 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 TMEM143Q96AN5 459 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 DRC1Q96MC2 740 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 SEZ6LQ9BYH1 1024 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 CBX8Q9HC52 389 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 POLD4Q9HCU8 107 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 GPRC5CQ9NQ84 441 aa17.03■□□□□ 0.32
LINC00116-201ENST00000414416 ARVCFO00192 962 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 TREHO43280 583 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 SMC2O95347 1197 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 TMOD1P28289 359 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 DNM2P50570 870 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 LUZP1Q86V48 1076 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 FAM200AQ8TCP9 573 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 SMARCE1Q969G3 411 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 ZHX3Q9H4I2 956 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 PCDHA5Q9Y5H7 936 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 PCDHA2Q9Y5H9 948 aa17.02■□□□□ 0.32
LINC00116-201ENST00000414416 RSPH10B2B2RC85 870 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 FAM13AO94988 1023 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 RPN1P04843 607 aaKnown RBP17.01■□□□□ 0.31
LINC00116-201ENST00000414416 RSPH10BP0C881 870 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 CYP2C9P11712 490 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 COL6A1P12109 1028 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 CLCN3P51790 818 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 UNC13DQ70J99 1090 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 CCDC65Q8IXS2 484 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 TCP11Q8WWU5 503 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 KIFAP3Q92845 792 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 PAWRQ96IZ0 340 aaKnown RBP17.01■□□□□ 0.31
LINC00116-201ENST00000414416 C11orf49Q9H6J7 331 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 DNAH12Q6ZR08 3092 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 PVALEFA0A1B0GWK0 134 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 SFI1A8K8P3 1242 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 MAPK7Q13164 816 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 STX1AQ16623 288 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 PTGISQ16647 500 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 IER5Q5VY09 327 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 DAW1Q8N136 415 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 SPATA20Q8TB22 786 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 POLR3FQ9H1D9 316 aaPredicted RBP17.01■□□□□ 0.31
LINC00116-201ENST00000414416 PANK4Q9NVE7 773 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 COL4A3BPQ9Y5P4 624 aa17.01■□□□□ 0.31
LINC00116-201ENST00000414416 FRMD3A2A2Y4 597 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 AP5Z1O43299 807 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 EN2P19622 333 aaPredicted RBP17■□□□□ 0.31
LINC00116-201ENST00000414416 ZNF165P49910 485 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 ATN1P54259 1190 aaPredicted RBP17■□□□□ 0.31
LINC00116-201ENST00000414416 MKRN4PQ13434 485 aaPredicted RBP17■□□□□ 0.31
LINC00116-201ENST00000414416 DRP2Q13474 957 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 DPCR1Q3MIW9 517 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 MTERF4Q7Z6M4 381 aaKnown RBP17■□□□□ 0.31
LINC00116-201ENST00000414416 LINC01465Q8N7H1 131 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 PSPC1Q8WXF1 523 aaKnown RBP17■□□□□ 0.31
LINC00116-201ENST00000414416 GSDMAQ96QA5 445 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 PARVGQ9HBI0 331 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 TRMT13Q9NUP7 481 aaKnown RBP17■□□□□ 0.31
LINC00116-201ENST00000414416 SMIM35A0A1B0GVV1 85 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 KLRC4O43908 158 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 ARL2P36404 184 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 SARSP49591 514 aaKnown RBP17■□□□□ 0.31
LINC00116-201ENST00000414416 CDK7P50613 346 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 ZNF131P52739 623 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 UVSSAQ2YD98 709 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 HERC4Q5GLZ8 1057 aaPredicted RBP17■□□□□ 0.31
LINC00116-201ENST00000414416 TAF2Q6P1X5 1199 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 SLC39A5Q6ZMH5 540 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 RUFY4Q6ZNE9 571 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 NECAB2Q7Z6G3 386 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 MYCT1Q8N699 235 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 CCDC47Q96A33 483 aaKnown RBP17■□□□□ 0.31
LINC00116-201ENST00000414416 EXOC1Q9NV70 894 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 ANO10Q9NW15 660 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 SUCLA2Q9P2R7 463 aaPredicted RBP17■□□□□ 0.31
LINC00116-201ENST00000414416 NOD1Q9Y239 953 aa17■□□□□ 0.31
LINC00116-201ENST00000414416 TRIP12Q14669 1992 aaPredicted RBP16.99■□□□□ 0.31
LINC00116-201ENST00000414416 EVPLQ92817 2033 aa16.99■□□□□ 0.31
LINC00116-201ENST00000414416 GAP43P17677 238 aa16.99■□□□□ 0.31
LINC00116-201ENST00000414416 RTP1P59025 263 aa16.99■□□□□ 0.31
LINC00116-201ENST00000414416 COASYQ13057 564 aa16.99■□□□□ 0.31
LINC00116-201ENST00000414416 KMT5BQ4FZB7 885 aa16.99■□□□□ 0.31
LINC00116-201ENST00000414416 NT5DC1Q5TFE4 455 aa16.99■□□□□ 0.31
LINC00116-201ENST00000414416 KIAA0319LQ8IZA0 1049 aa16.99■□□□□ 0.31
LINC00116-201ENST00000414416 PRPF31Q8WWY3 499 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms