RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 LETM2Q2VYF4 491 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 FAM83BQ5T0W9 1011 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 YTHDF3Q7Z739 585 aaKnown RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 CCDC65Q8IXS2 484 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 ATRIPQ8WXE1 791 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 DHX38Q92620 1227 aaKnown RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 NACC1Q96RE7 527 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 NFKBIZQ9BYH8 718 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 PXMP2Q9NR77 195 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 ZNHIT6Q9NWK9 470 aaKnown RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 AIPL1Q9NZN9 384 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 DIS3Q9Y2L1 958 aaKnown RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 CHUKO15111 745 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 GAS2O43903 313 aaKnown RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 MED24O75448 989 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 RAD17O75943 681 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 SLC25A27O95847 323 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 GYPCP04921 128 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 PLA2G4BP0C869 781 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 ERCC3P19447 782 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 GGCXP38435 758 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 ECE1P42892 770 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 HADHBP55084 474 aaKnown RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 GTF2BQ00403 316 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 KCNA1Q09470 495 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 C10orf76Q5T2E6 689 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 SPATS2Q86XZ4 545 aaKnown RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 FAM76AQ8TAV0 307 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 RASGRP4Q8TDF6 673 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 JAKMIP2Q96AA8 810 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 NAPGQ99747 312 aaPredicted RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 SYT11Q9BT88 431 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 CENPHQ9H3R5 247 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 METTL14Q9HCE5 456 aaKnown RBP5.87□□□□□ -1.47
VPS41-203ENST00000395969 LZTFL1Q9NQ48 299 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 MORF4L1Q9UBU8 362 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 INTUQ9ULD6 942 aa5.87□□□□□ -1.47
VPS41-203ENST00000395969 AKR1B15C9JRZ8 316 aaPredicted RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 SKAP2O75563 359 aaPredicted RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 CNMDO75829 334 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 TFRCP02786 760 aaKnown RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 ZBED6P86452 979 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 FKBP3Q00688 224 aaKnown RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 COG2Q14746 738 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 FILIP1LQ4L180 1135 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 ZNF569Q5MCW4 686 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 SLC35F6Q8N357 371 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 GIMAP7Q8NHV1 300 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 DDX12PQ92771 950 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 EIF2AK1Q9BQI3 630 aaKnown RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 TYW1Q9NV66 732 aaKnown RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 EXOC1Q9NV70 894 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 PLAGL2Q9UPG8 496 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 MPHOSPH10O00566 681 aaKnown RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 ZEB2O60315 1214 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 P4HBP07237 508 aaKnown RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 ADRB2P07550 413 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 KCNA2P16389 499 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 ITGB5P18084 799 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 TECP42680 631 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 JAM2P57087 298 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 MRPS9P82933 396 aaKnown RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 SKOR1P84550 965 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 MAP2K1Q02750 393 aaPredicted RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 PLCB4Q15147 1175 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 SHROOM1Q2M3G4 852 aaPredicted RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 ANKRD40Q6AI12 368 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 POTEEQ6S8J3 1075 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 KCNK18Q7Z418 384 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 PDILTQ8N807 584 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 SPDYE1Q8NFV5 336 aaPredicted RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 BCAS4Q8TDM0 211 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 SCFD1Q8WVM8 642 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 RIN2Q8WYP3 895 aaPredicted RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 TEKT3Q9BXF9 490 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 CAPS2Q9BXY5 557 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 COL4A3BPQ9Y5P4 624 aa5.86□□□□□ -1.47
VPS41-203ENST00000395969 MAFBQ9Y5Q3 323 aaPredicted RBP5.86□□□□□ -1.47
VPS41-203ENST00000395969 hCG_1642624A0A1W2PR95 340 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 SHTN1A0MZ66 631 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 A6NNZ2 444 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 TCP10L2B9ZVM9 353 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 BHMG1C9JSJ3 638 aaPredicted RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 F8W031 263 aaPredicted RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 H0YCG3 227 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 MYO1FO00160 1098 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 ZBED4O75132 1171 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 RTN2O75298 545 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 RASSF9O75901 435 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 SCNN1AP37088 669 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 PEX19P40855 299 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 STK4Q13043 487 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 CRYMQ14894 314 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 TUBB8Q3ZCM7 444 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 VWA3BQ502W6 1294 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 RINT1Q6NUQ1 792 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 TRAPPC11Q7Z392 1133 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 MYOCDQ8IZQ8 938 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 FAM133AQ8N9E0 248 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms