RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 DAW1Q8N136 415 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 RETREG2Q8NC44 543 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 ZBTB10Q96DT7 871 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 CTAGE1Q96RT6 745 aa13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 HOOK1Q9UJC3 728 aaKnown RBP13.76□□□□□ -0.21
NIF3L1-201ENST00000359683 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 SMIM35A0A1B0GVV1 85 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 PRR29P0C7W0 189 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 DPYDQ12882 1025 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 MAEAQ7L5Y9 396 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 KIAA0319LQ8IZA0 1049 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 LRRC71Q8N4P6 559 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 SPATA20Q8TB22 786 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 TCP11Q8WWU5 503 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 TMEM143Q96AN5 459 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 REEP2Q9BRK0 252 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 BLZF1Q9H2G9 400 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 SUGCTQ9HAC7 445 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 POLD4Q9HCU8 107 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 ODF2LQ9ULJ1 636 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 NR2E3Q9Y5X4 410 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 EVPLQ92817 2033 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 PVALEFA0A1B0GWK0 134 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 FRMD3A2A2Y4 597 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 KLRC4O43908 158 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 HIP1RO75146 1068 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 KRT18P05783 430 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 CYP2C9P11712 490 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 TMOD1P28289 359 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 DNM2P50570 870 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 ZNF131P52739 623 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 RTP1P59025 263 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 RAD51AP2Q09MP3 1159 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 DRP2Q13474 957 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 PNOCQ13519 176 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 CAMK4Q16566 473 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 PTGISQ16647 500 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 FAM102BQ5T8I3 360 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 TAF2Q6P1X5 1199 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 RUFY4Q6ZNE9 571 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 ANKRD33Q7Z3H0 272 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 SERINC5Q86VE9 423 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 FAM126BQ8IXS8 530 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 METTL13Q8N6R0 699 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 KIFAP3Q92845 792 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 NUP62CLQ9H1M0 184 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 GPRC5CQ9NQ84 441 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 TRMT13Q9NUP7 481 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 TMEM63CQ9P1W3 806 aa13.75□□□□□ -0.21
NIF3L1-201ENST00000359683 MROH7Q68CQ1 1323 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 SFI1A8K8P3 1242 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 RSPH10B2B2RC85 870 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 B4GALT4O60513 344 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 CD4P01730 458 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 RSPH10BP0C881 870 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 SARSP49591 514 aaKnown RBP13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 CLCN3P51790 818 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 ATN1P54259 1190 aaPredicted RBP13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 ASIC1P78348 528 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 PTK7Q13308 1070 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 UNC13DQ70J99 1090 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 RPAINQ86UA6 219 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 NME8Q8N427 588 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 DRC1Q96MC2 740 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 TOX2Q96NM4 488 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 TRPV6Q9H1D0 765 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 C17orf75Q9HAS0 396 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 SUCLA2Q9P2R7 463 aaPredicted RBP13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 PCDHA5Q9Y5H7 936 aa13.74□□□□□ -0.21
NIF3L1-201ENST00000359683 ASAP2O43150 1006 aa13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 EVI5O60447 810 aa13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 EHHADHQ08426 723 aa13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 CCDC183Q5T5S1 534 aa13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 NT5DC1Q5TFE4 455 aa13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 RBM43Q6ZSC3 357 aaKnown RBP13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 CCDC65Q8IXS2 484 aa13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 PRPF31Q8WWY3 499 aaKnown RBP13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 PSPC1Q8WXF1 523 aaKnown RBP13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 GSDMAQ96QA5 445 aa13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 NTPCRQ9BSD7 190 aaKnown RBP13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 POLR3FQ9H1D9 316 aaPredicted RBP13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 PANK4Q9NVE7 773 aa13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 KIAA1468Q9P260 1216 aa13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 COL4A3BPQ9Y5P4 624 aa13.73□□□□□ -0.21
NIF3L1-201ENST00000359683 TBCAO75347 108 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 FAM13AO94988 1023 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 SMC2O95347 1197 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 RPN1P04843 607 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 RPLP2P05387 115 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 PLS3P13797 630 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 IDEP14735 1019 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 GAP43P17677 238 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 GLRA2P23416 452 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 MXD4Q14582 209 aaPredicted RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 KCNB1Q14721 858 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 LRRC26Q2I0M4 334 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 TRIM71Q2Q1W2 868 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 CAVIN1Q6NZI2 390 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 ZNF710Q8N1W2 664 aa13.72□□□□□ -0.21
NIF3L1-201ENST00000359683 ASAP3Q8TDY4 903 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms