RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 TTC13Q8NBP0 860 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 ZNF564Q8TBZ8 553 aaPredicted RBP19.31■□□□□ 0.68
SMC4-201ENST00000344722 ANKZF1Q9H8Y5 726 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 PLEKHG2Q9H7P9 1386 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 NOP56O00567 594 aaKnown RBP19.31■□□□□ 0.68
SMC4-201ENST00000344722 EPHA10Q5JZY3 1008 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 COA7Q96BR5 231 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 CPDO75976 1380 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 HIC1Q14526 733 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 WWP1Q9H0M0 922 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 POLD4Q9HCU8 107 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 ZNF277Q9NRM2 450 aaPredicted RBP19.31■□□□□ 0.68
SMC4-201ENST00000344722 AGPAT5Q9NUQ2 364 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 TRPC5Q9UL62 973 aaPredicted RBP19.31■□□□□ 0.68
SMC4-201ENST00000344722 TRIM33Q9UPN9 1127 aa19.31■□□□□ 0.68
SMC4-201ENST00000344722 TTLL1O95922 423 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 ABCD1P33897 745 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 TEKT4Q8WW24 435 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 CDCA7Q9BWT1 371 aaPredicted RBP19.3■□□□□ 0.68
SMC4-201ENST00000344722 KDM4CQ9H3R0 1056 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 DLGAP2Q9P1A6 1054 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 ANKFY1Q9P2R3 1169 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 G3BP2Q9UN86 482 aaKnown RBP19.3■□□□□ 0.68
SMC4-201ENST00000344722 ACADSP16219 412 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 SERPINB4P48594 390 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 TRAPPC3LQ5T215 181 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 DNAJC5BQ9UF47 199 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 IPO11Q9UI26 975 aaKnown RBP19.3■□□□□ 0.68
SMC4-201ENST00000344722 RFX1P22670 979 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 TCP10Q12799 353 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 USP38Q8NB14 1042 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 CALN1Q9BXU9 219 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 TRPV6Q9H1D0 765 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 RAB21Q9UL25 225 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 DNAJC6O75061 913 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 PHF2O75151 1096 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 IGKV5-2P06315 115 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 VHLP40337 213 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 TXNRD1Q16881 649 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 DNAL1Q4LDG9 190 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 TBC1D9BQ66K14 1250 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 BZW1Q7L1Q6 419 aaKnown RBP19.3■□□□□ 0.68
SMC4-201ENST00000344722 KIF2BQ8N4N8 673 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 ZNF577Q9BSK1 485 aa19.3■□□□□ 0.68
SMC4-201ENST00000344722 ADCY10Q96PN6 1610 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 ANP32DO95626 131 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 NOP14P78316 857 aaKnown RBP19.29■□□□□ 0.68
SMC4-201ENST00000344722 GABPAQ06546 454 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 CCDC124Q96CT7 223 aaKnown RBP19.29■□□□□ 0.68
SMC4-201ENST00000344722 ERP27Q96DN0 273 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 EHD2Q9NZN4 543 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 MAN1A2O60476 641 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 NQO1P15559 274 aaKnown RBP19.29■□□□□ 0.68
SMC4-201ENST00000344722 MCF2L2Q86YR7 1114 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 NUP85Q9BW27 656 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 GOLGA8SH3BPF8 625 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 CDH16O75309 829 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 SRGAP2BP0DMP2 458 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 CYLC2Q14093 348 aaPredicted RBP19.29■□□□□ 0.68
SMC4-201ENST00000344722 HEMGNQ9BXL5 484 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 TRABDQ9H4I3 376 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 DTX3LQ8TDB6 740 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 ZBTB10Q96DT7 871 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 ORAI2Q96SN7 254 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 MED7O43513 233 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 KITP10721 976 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 IL1RL1Q01638 556 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 KRT17Q04695 432 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 RASGRF1Q13972 1273 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 SPOPLQ6IQ16 392 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 ATP11CQ8NB49 1132 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 TRIM51Q9BSJ1 452 aa19.29■□□□□ 0.68
SMC4-201ENST00000344722 TESPA1A2RU30 521 aaPredicted RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 HSD17B3P37058 310 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 PSMD7P51665 324 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 ICA1Q05084 483 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 NAIF1Q69YI7 327 aaPredicted RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 FAF2Q96CS3 445 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 RIOK1Q9BRS2 568 aaKnown RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 KCND1Q9NSA2 647 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 PDS5AQ29RF7 1337 aaKnown RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 IQSEC2Q5JU85 1478 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 KNOP1Q1ED39 458 aaKnown RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 CERKLQ49MI3 558 aaPredicted RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 IZUMO3Q5VZ72 239 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 ACAD11Q709F0 780 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 KMT5AQ9NQR1 393 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 MAGEA13PA6NCF6 341 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 ZFXP17010 805 aaPredicted RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 DRAP1Q14919 205 aaPredicted RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 NAALADL2Q58DX5 795 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 PAPD7Q5XG87 772 aaKnown RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 CCDC17Q96LX7 622 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 CYP2D7A0A087X1C5 515 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 PRLRP16471 622 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 ZC3H15Q8WU90 426 aaKnown RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 DACT3Q96B18 629 aaPredicted RBP19.28■□□□□ 0.68
SMC4-201ENST00000344722 KLC2Q9H0B6 622 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 SPC25Q9HBM1 224 aa19.28■□□□□ 0.68
SMC4-201ENST00000344722 SMARCAL1Q9NZC9 954 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms