RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 FGFR2P21802 821 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 MSH2P43246 934 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 GCLMP48507 274 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 GNPTABQ3T906 1256 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 XKR9Q5GH70 373 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 ZNF507Q8TCN5 953 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 VTI1AQ96AJ9 217 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 TSNARE1Q96NA8 513 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 NACC1Q96RE7 527 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 SRP68Q9UHB9 627 aaKnown RBP11.85□□□□□ -0.51
CCDC170-201ENST00000239374 SCOCQ9UIL1 159 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 NAGPAQ9UK23 515 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 BCS1LQ9Y276 419 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 WNT7AO00755 349 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 TOM1O60784 492 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 GRB10Q13322 594 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 RCN2Q14257 317 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 RPUSD2Q8IZ73 545 aaKnown RBP11.85□□□□□ -0.51
CCDC170-201ENST00000239374 KIAA0895Q8NCT3 520 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 C1orf54Q8WWF1 131 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 LRRC37BQ96QE4 947 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 RIOK1Q9BRS2 568 aaKnown RBP11.85□□□□□ -0.51
CCDC170-201ENST00000239374 ERP44Q9BS26 406 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 FGFR1OP2Q9NVK5 253 aa11.85□□□□□ -0.51
CCDC170-201ENST00000239374 DDX20Q9UHI6 824 aaKnown RBP11.85□□□□□ -0.51
CCDC170-201ENST00000239374 USP15Q9Y4E8 981 aaPredicted RBP11.85□□□□□ -0.51
CCDC170-201ENST00000239374 GOLGA8IPA6NC78 632 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 GOLGA8JA6NMD2 632 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 LONRF1Q17RB8 773 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 LGSNQ5TDP6 509 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 EPM2AIP1Q7L775 607 aaPredicted RBP11.84□□□□□ -0.51
CCDC170-201ENST00000239374 SPATA21Q7Z572 469 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 SDCCAG8Q86SQ7 713 aaPredicted RBP11.84□□□□□ -0.51
CCDC170-201ENST00000239374 JAMLQ86YT9 394 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 KIAA0825Q8IV33 1275 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 LRRC34Q8IZ02 419 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 OGFOD1Q8N543 542 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 NSMCE1Q8WV22 266 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 CCDC17Q96LX7 622 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 FERMT1Q9BQL6 677 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 VCX3BQ9H321 246 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 SKIP12755 728 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 HSPA9P38646 679 aaKnown RBP11.84□□□□□ -0.51
CCDC170-201ENST00000239374 FAM98CQ17RN3 349 aaKnown RBP11.84□□□□□ -0.51
CCDC170-201ENST00000239374 ANAPC7Q9UJX3 599 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 AGLP35573 1532 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 SGK1O00141 431 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 ARHGAP4P98171 946 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 SPARCL1Q14515 664 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 APBB1IPQ7Z5R6 666 aaPredicted RBP11.84□□□□□ -0.51
CCDC170-201ENST00000239374 POMGNT1Q8WZA1 660 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 ZNF577Q9BSK1 485 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 MEGF6O75095 1541 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 VEGFAP15692 232 aaPredicted RBP11.84□□□□□ -0.51
CCDC170-201ENST00000239374 RAD23BP54727 409 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 MEI1Q5TIA1 1274 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 TPCN2Q8NHX9 752 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 INTS2Q9H0H0 1204 aaKnown RBP11.84□□□□□ -0.51
CCDC170-201ENST00000239374 ARL2BPQ9Y2Y0 163 aa11.84□□□□□ -0.51
CCDC170-201ENST00000239374 ZNF233A6NK53 670 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 ERVK-9P63128 1117 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 LMNB2Q03252 620 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 TBC1D9BQ66K14 1250 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 TRIM59Q8IWR1 403 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 ADGRF4Q8IZF3 695 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 FBXO41Q8TF61 875 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 C8orf37Q96NL8 207 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 SAYSD1Q9NPB0 183 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 CNOT8Q9UFF9 292 aaKnown RBP11.83□□□□□ -0.52
CCDC170-201ENST00000239374 ENO4A6NNW6 628 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 FOXP2O15409 715 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 HP1BP3Q5SSJ5 553 aaPredicted RBP11.83□□□□□ -0.52
CCDC170-201ENST00000239374 GJB7Q6PEY0 223 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 CNPY4Q8N129 248 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 MAD2L2Q9UI95 211 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.83□□□□□ -0.52
CCDC170-201ENST00000239374 PDXKO00764 312 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 CAND2O75155 1236 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 DCTN3O75935 186 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 TRPC3Q13507 836 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 CLEC4GQ6UXB4 293 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 ZNF564Q8TBZ8 553 aaPredicted RBP11.83□□□□□ -0.52
CCDC170-201ENST00000239374 ACCSQ96QU6 501 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 MED15Q96RN5 788 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 SIGLEC1Q9BZZ2 1709 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 A0A0G2JND7 137 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 FANCGO15287 622 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 FSBPO95073 299 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 RNASELQ05823 741 aaKnown RBP11.83□□□□□ -0.52
CCDC170-201ENST00000239374 CLEC10AQ8IUN9 316 aa11.83□□□□□ -0.52
CCDC170-201ENST00000239374 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.83□□□□□ -0.52
CCDC170-201ENST00000239374 SUCLA2Q9P2R7 463 aaPredicted RBP11.83□□□□□ -0.52
CCDC170-201ENST00000239374 SLC37A4O43826 429 aa11.82□□□□□ -0.52
CCDC170-201ENST00000239374 KCNJ1P48048 391 aa11.82□□□□□ -0.52
CCDC170-201ENST00000239374 YWHAGP61981 247 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC170-201ENST00000239374 TTBK2Q6IQ55 1244 aa11.82□□□□□ -0.52
CCDC170-201ENST00000239374 NUDCD1Q96RS6 583 aa11.82□□□□□ -0.52
CCDC170-201ENST00000239374 NUP85Q9BW27 656 aa11.82□□□□□ -0.52
CCDC170-201ENST00000239374 IGF2BP3O00425 579 aaKnown RBP eCLIP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms