RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 DDX12PQ92771 950 aa14.6□□□□□ -0.07
TIMP1-201ENST00000218388 CCDC47Q96A33 483 aaKnown RBP14.6□□□□□ -0.07
TIMP1-201ENST00000218388 TMEM143Q96AN5 459 aa14.6□□□□□ -0.07
TIMP1-201ENST00000218388 IFT74Q96LB3 600 aa14.6□□□□□ -0.07
TIMP1-201ENST00000218388 C7orf25Q9BPX7 421 aa14.6□□□□□ -0.07
TIMP1-201ENST00000218388 TRIM9Q9C026 710 aa14.6□□□□□ -0.07
TIMP1-201ENST00000218388 FAM49AQ9H0Q0 323 aaPredicted RBP14.6□□□□□ -0.07
TIMP1-201ENST00000218388 TRPV6Q9H1D0 765 aa14.6□□□□□ -0.07
TIMP1-201ENST00000218388 POLR3FQ9H1D9 316 aaPredicted RBP14.6□□□□□ -0.07
TIMP1-201ENST00000218388 RNF39Q9H2S5 420 aa14.6□□□□□ -0.07
TIMP1-201ENST00000218388 C17orf75Q9HAS0 396 aa14.6□□□□□ -0.07
TIMP1-201ENST00000218388 XPNPEP1Q9NQW7 623 aa14.6□□□□□ -0.07
TIMP1-201ENST00000218388 PDLIM7Q9NR12 457 aa14.6□□□□□ -0.07
TIMP1-201ENST00000218388 GTPBP6O43824 516 aaPredicted RBP14.59□□□□□ -0.07
TIMP1-201ENST00000218388 HIP1RO75146 1068 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 CLTBP09497 229 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 ASIC1P78348 528 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 TFDP1Q14186 410 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 POSTNQ15063 836 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 ARSHQ5FYA8 562 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 CNNM4Q6P4Q7 775 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 RUFY4Q6ZNE9 571 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 DYMQ7RTS9 669 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 RPAINQ86UA6 219 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 CCDC65Q8IXS2 484 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 LINC01465Q8N7H1 131 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 DNAJB3Q8WWF6 145 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 STAMQ92783 540 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 REEP2Q9BRK0 252 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 SUCLA2Q9P2R7 463 aaPredicted RBP14.59□□□□□ -0.07
TIMP1-201ENST00000218388 COL4A3BPQ9Y5P4 624 aa14.59□□□□□ -0.07
TIMP1-201ENST00000218388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.58□□□□□ -0.08
TIMP1-201ENST00000218388 IDEP14735 1019 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 GAP43P17677 238 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 ARL2P36404 184 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 THPOP40225 353 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 RAD51AP2Q09MP3 1159 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 DMP1Q13316 513 aaPredicted RBP14.58□□□□□ -0.08
TIMP1-201ENST00000218388 GIT2Q14161 759 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 SKOR2Q2VWA4 1001 aaPredicted RBP14.58□□□□□ -0.08
TIMP1-201ENST00000218388 SH3RF1Q7Z6J0 888 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 RHPN2Q8IUC4 686 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 KIAA0319LQ8IZA0 1049 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 SLC17A8Q8NDX2 589 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 GPT2Q8TD30 523 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 SYAP1Q96A49 352 aaPredicted RBP14.58□□□□□ -0.08
TIMP1-201ENST00000218388 ZBTB10Q96DT7 871 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 SCLT1Q96NL6 688 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 CTAGE1Q96RT6 745 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 NUP62CLQ9H1M0 184 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 ZHX3Q9H4I2 956 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 PARVGQ9HBI0 331 aa14.58□□□□□ -0.08
TIMP1-201ENST00000218388 LARSQ9P2J5 1176 aaKnown RBP14.58□□□□□ -0.08
TIMP1-201ENST00000218388 NPHP3-ACAD11A0A0J9YXS1 232 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 PVALEFA0A1B0GWK0 134 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 SMC2O95347 1197 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 VTNP04004 478 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 PLS3P13797 630 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 SMTNP53814 917 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 MRPS6P82932 125 aaKnown RBP14.57□□□□□ -0.08
TIMP1-201ENST00000218388 RBL2Q08999 1139 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 FAAP100Q0VG06 881 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 CUL4BQ13620 913 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 UNC13DQ70J99 1090 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 ZNF410Q86VK4 478 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 GRAMD1CQ8IYS0 662 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 PRPF31Q8WWY3 499 aaKnown RBP14.57□□□□□ -0.08
TIMP1-201ENST00000218388 BLZF1Q9H2G9 400 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 CLSTN2Q9H4D0 955 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 GPRC5CQ9NQ84 441 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 TMEM39AQ9NV64 488 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 SEL1LQ9UBV2 794 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 PRKAG2Q9UGJ0 569 aa14.57□□□□□ -0.08
TIMP1-201ENST00000218388 H0YCG3 227 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 SCP2P22307 547 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 ABCD1P33897 745 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 NAMPTP43490 491 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 ZNF131P52739 623 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 CACNB1Q02641 598 aaPredicted RBP14.56□□□□□ -0.08
TIMP1-201ENST00000218388 LAMTOR4Q0VGL1 99 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 MAPK7Q13164 816 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
TIMP1-201ENST00000218388 DRP2Q13474 957 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 NFKBIBQ15653 356 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 ZBTB8OSQ8IWT0 167 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 MYCT1Q8N699 235 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 DEPTORQ8TB45 409 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 ASAP3Q8TDY4 903 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 NLRP7Q8WX94 980 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 DHX38Q92620 1227 aaKnown RBP14.56□□□□□ -0.08
TIMP1-201ENST00000218388 DNAJC19Q96DA6 116 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 NLRP4Q96MN2 994 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 HIPK3Q9H422 1215 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 PRDM5Q9NQX1 630 aaPredicted RBP14.56□□□□□ -0.08
TIMP1-201ENST00000218388 PANK4Q9NVE7 773 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 RMND1Q9NWS8 449 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 TRPV2Q9Y5S1 764 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 BRCA2P51587 3418 aa14.56□□□□□ -0.08
TIMP1-201ENST00000218388 PHLPP2Q6ZVD8 1323 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms