RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 DCAF15Q66K64 600 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 TRIM68Q6AZZ1 485 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 PDXDC2PQ6P474 469 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 RSRC2Q7L4I2 434 aaKnown RBP13.39□□□□□ -0.27
CDH1-212ENST00000611625 SDCCAG8Q86SQ7 713 aaPredicted RBP13.39□□□□□ -0.27
CDH1-212ENST00000611625 MMGT1Q8N4V1 131 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 ATP2A3Q93084 1043 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 CFAP57Q96MR6 1250 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 CNOT8Q9UFF9 292 aaKnown RBP13.39□□□□□ -0.27
CDH1-212ENST00000611625 PLAGL2Q9UPG8 496 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 TRIM66O15016 1216 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 YWHAGP61981 247 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDH1-212ENST00000611625 NFIXQ14938 502 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 BSPRYQ5W0U4 402 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 PPP1R2P3Q6NXS1 205 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 CLEC10AQ8IUN9 316 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 RPUSD2Q8IZ73 545 aaKnown RBP13.39□□□□□ -0.27
CDH1-212ENST00000611625 DAGLBQ8NCG7 672 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 GDAP1Q8TB36 358 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 FAM217BQ9NTX9 383 aaPredicted RBP13.39□□□□□ -0.27
CDH1-212ENST00000611625 IFT172Q9UG01 1749 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 EXOC1LA0A1B0GW35 172 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 PMS2P54278 862 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 ITPK1Q13572 414 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 PKN1Q16512 942 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 WDR93Q6P2C0 686 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 C16orf86Q6ZW13 317 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 ANAPC7Q9UJX3 599 aa13.39□□□□□ -0.27
CDH1-212ENST00000611625 RPSAP08865 295 aaKnown RBP13.38□□□□□ -0.27
CDH1-212ENST00000611625 GUCY2CP25092 1073 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 SOX5P35711 763 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 NT5DC1Q5TFE4 455 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 DNAJC24Q6P3W2 148 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 BANK1Q8NDB2 785 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDH1-212ENST00000611625 EIF2AK1Q9BQI3 630 aaKnown RBP13.38□□□□□ -0.27
CDH1-212ENST00000611625 NRBP2Q9NSY0 501 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 FAM187AA6NFU0 413 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 EIF3HO15372 352 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDH1-212ENST00000611625 PDHBP11177 359 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 TBX2Q13207 712 aaPredicted RBP13.38□□□□□ -0.27
CDH1-212ENST00000611625 ZNF746Q6NUN9 644 aaPredicted RBP13.38□□□□□ -0.27
CDH1-212ENST00000611625 TTI2Q6NXR4 508 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 SPATA24Q86W54 205 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 METTL13Q8N6R0 699 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 DAGLAQ9Y4D2 1042 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 FTLP02792 175 aaPredicted RBP13.38□□□□□ -0.27
CDH1-212ENST00000611625 UCHL3P15374 230 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 ARL1P40616 181 aaPredicted RBP13.38□□□□□ -0.27
CDH1-212ENST00000611625 CCHCR1Q8TD31 782 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 TRIM6Q9C030 488 aaPredicted RBP13.38□□□□□ -0.27
CDH1-212ENST00000611625 EYA4O95677 639 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 INHBAP08476 426 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 PLEKP08567 350 aaPredicted RBP13.38□□□□□ -0.27
CDH1-212ENST00000611625 CHRNA3P32297 505 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 EDRF1Q3B7T1 1238 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 KCND1Q9NSA2 647 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 MAD2L2Q9UI95 211 aa13.38□□□□□ -0.27
CDH1-212ENST00000611625 ESYT2A0FGR8 921 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 GOLGA8SH3BPF8 625 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 H7C0C1 242 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 ACTN1P12814 892 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 ATP5OP48047 213 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 FXR2P51116 673 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDH1-212ENST00000611625 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDH1-212ENST00000611625 MIS12Q9H081 205 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 KBTBD4Q9NVX7 518 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 LRRD1A4D1F6 860 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 CHUKO15111 745 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 ADRA2BP18089 450 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 PSMC4P43686 418 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 PPP2R5DQ14738 602 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 PHLDB3Q6NSJ2 640 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 RNF207Q6ZRF8 634 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 MIGA2Q7L4E1 593 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 TBC1D1Q86TI0 1168 aaPredicted RBP13.37□□□□□ -0.27
CDH1-212ENST00000611625 RNPC3Q96LT9 517 aaKnown RBP13.37□□□□□ -0.27
CDH1-212ENST00000611625 TDRD3Q9H7E2 651 aaKnown RBP13.37□□□□□ -0.27
CDH1-212ENST00000611625 MYO5BQ9ULV0 1848 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 ZNF233A6NK53 670 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 VAMP7P51809 220 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 SARNPP82979 210 aaKnown RBP13.37□□□□□ -0.27
CDH1-212ENST00000611625 PODNQ7Z5L7 613 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 HAUS1Q96CS2 278 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 CALR3Q96L12 384 aaKnown RBP13.37□□□□□ -0.27
CDH1-212ENST00000611625 LACRTQ9GZZ8 138 aa13.37□□□□□ -0.27
CDH1-212ENST00000611625 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
CDH1-212ENST00000611625 ZBTB22O15209 634 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 EVI5O60447 810 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 KLRC1P26715 233 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 ANXA13P27216 316 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 YARSP54577 528 aaKnown RBP13.36□□□□□ -0.27
CDH1-212ENST00000611625 SESN3P58005 492 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 MTERF2Q49AM1 385 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 ZNF564Q8TBZ8 553 aaPredicted RBP13.36□□□□□ -0.27
CDH1-212ENST00000611625 RAD17O75943 681 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 RFX1P22670 979 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 KLRK1P26718 216 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 SMARCA1P28370 1054 aa13.36□□□□□ -0.27
CDH1-212ENST00000611625 NMT1P30419 496 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms