RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 LZTS1Q9Y250 596 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 C5orf42Q9H799 3197 aa19.28■□□□□ 0.68
PNKP-210ENST00000597965 EVPLQ92817 2033 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 FNDC1Q4ZHG4 1894 aaPredicted RBP19.27■□□□□ 0.68
PNKP-210ENST00000597965 IGLV3-22A0A075B6J6 115 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 FGF18O76093 207 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 C22orf31O95567 290 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 ZSCAN20P17040 1043 aaPredicted RBP19.27■□□□□ 0.68
PNKP-210ENST00000597965 IBSPP21815 317 aaPredicted RBP19.27■□□□□ 0.68
PNKP-210ENST00000597965 AKAP17AQ02040 695 aaKnown RBP19.27■□□□□ 0.68
PNKP-210ENST00000597965 KIZQ2M2Z5 673 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 HFE2Q6ZVN8 426 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 BMP8AQ7Z5Y6 402 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 ADGRD2Q7Z7M1 963 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 ABI1Q8IZP0 508 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 CRYGNQ8WXF5 182 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 SAMM50Q9Y512 469 aa19.27■□□□□ 0.68
PNKP-210ENST00000597965 ATF7P17544 494 aaPredicted RBP19.26■□□□□ 0.67
PNKP-210ENST00000597965 PPM1AP35813 382 aa19.26■□□□□ 0.67
PNKP-210ENST00000597965 FAM189BP81408 668 aa19.26■□□□□ 0.67
PNKP-210ENST00000597965 ALYREFQ86V81 257 aaKnown RBP19.26■□□□□ 0.67
PNKP-210ENST00000597965 CCDC148Q8NFR7 591 aa19.26■□□□□ 0.67
PNKP-210ENST00000597965 TMEM40Q8WWA1 233 aa19.26■□□□□ 0.67
PNKP-210ENST00000597965 TCEANC2Q96MN5 208 aa19.26■□□□□ 0.67
PNKP-210ENST00000597965 OSMRQ99650 979 aa19.26■□□□□ 0.67
PNKP-210ENST00000597965 PHF7Q9BWX1 381 aaPredicted RBP19.26■□□□□ 0.67
PNKP-210ENST00000597965 NRBP2Q9NSY0 501 aa19.26■□□□□ 0.67
PNKP-210ENST00000597965 PLXNA4Q9HCM2 1894 aa19.26■□□□□ 0.67
PNKP-210ENST00000597965 WDR64B1ANS9 1081 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 ZBTB42B2RXF5 422 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 LOC730098B7Z3J9 87 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 MGEA5O60502 916 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 CDC27P30260 824 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 GATMP50440 423 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 PLCB3Q01970 1234 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 KRT17Q04695 432 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 BMS1Q14692 1282 aaKnown RBP19.25■□□□□ 0.67
PNKP-210ENST00000597965 FAM102BQ5T8I3 360 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 COLGALT1Q8NBJ5 622 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 RSPH1Q8WYR4 309 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 FBXL18Q96ME1 805 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 TMEM117Q9H0C3 514 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 CDHR5Q9HBB8 845 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 NGRNQ9NPE2 291 aaKnown RBP19.25■□□□□ 0.67
PNKP-210ENST00000597965 FAM217BQ9NTX9 383 aaPredicted RBP19.25■□□□□ 0.67
PNKP-210ENST00000597965 TYW1Q9NV66 732 aaKnown RBP19.25■□□□□ 0.67
PNKP-210ENST00000597965 AKT3Q9Y243 479 aa19.25■□□□□ 0.67
PNKP-210ENST00000597965 USP15Q9Y4E8 981 aaPredicted RBP19.25■□□□□ 0.67
PNKP-210ENST00000597965 CARNS1A5YM72 827 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 GPR32O75388 356 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 CDC45O75419 566 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 ADD1P35611 737 aaKnown RBP19.24■□□□□ 0.67
PNKP-210ENST00000597965 CDC42EP1Q00587 391 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 NHLH1Q02575 133 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 CBX2Q14781 532 aaPredicted RBP19.24■□□□□ 0.67
PNKP-210ENST00000597965 DUSP6Q16828 381 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 ADCK5Q3MIX3 580 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 PRR16Q569H4 304 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 TMEM184AQ6ZMB5 413 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 CENPQQ7L2Z9 268 aaPredicted RBP19.24■□□□□ 0.67
PNKP-210ENST00000597965 FAM228AQ86W67 206 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 SUGP1Q8IWZ8 645 aaKnown RBP19.24■□□□□ 0.67
PNKP-210ENST00000597965 LRRC43Q8N309 656 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 RASGRP4Q8TDF6 673 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 GABBR1Q9UBS5 961 aa19.24■□□□□ 0.67
PNKP-210ENST00000597965 BARX2Q9UMQ3 279 aaPredicted RBP19.24■□□□□ 0.67
PNKP-210ENST00000597965 PRPF3O43395 683 aaKnown RBP19.23■□□□□ 0.67
PNKP-210ENST00000597965 GLP2RO95838 553 aa19.23■□□□□ 0.67
PNKP-210ENST00000597965 VTNP04004 478 aa19.23■□□□□ 0.67
PNKP-210ENST00000597965 HOXB8P17481 243 aaPredicted RBP19.23■□□□□ 0.67
PNKP-210ENST00000597965 ATP4AP20648 1035 aa19.23■□□□□ 0.67
PNKP-210ENST00000597965 EIF4BP23588 611 aaKnown RBP19.23■□□□□ 0.67
PNKP-210ENST00000597965 SFNP31947 248 aa19.23■□□□□ 0.67
PNKP-210ENST00000597965 CIITAP33076 1130 aa19.23■□□□□ 0.67
PNKP-210ENST00000597965 EFCAB12Q6NXP0 572 aa19.23■□□□□ 0.67
PNKP-210ENST00000597965 TRIM67Q6ZTA4 783 aa19.23■□□□□ 0.67
PNKP-210ENST00000597965 RASEFQ8IZ41 740 aa19.23■□□□□ 0.67
PNKP-210ENST00000597965 MRPS27Q92552 414 aaKnown RBP19.23■□□□□ 0.67
PNKP-210ENST00000597965 PBXIP1Q96AQ6 731 aa19.23■□□□□ 0.67
PNKP-210ENST00000597965 MRE11P49959 708 aa19.22■□□□□ 0.67
PNKP-210ENST00000597965 USP11P51784 963 aa19.22■□□□□ 0.67
PNKP-210ENST00000597965 NLRP11P59045 1033 aaKnown RBP19.22■□□□□ 0.67
PNKP-210ENST00000597965 DSC3Q14574 896 aa19.22■□□□□ 0.67
PNKP-210ENST00000597965 TRMT1LQ7Z2T5 733 aaKnown RBP19.22■□□□□ 0.67
PNKP-210ENST00000597965 FBXL16Q8N461 479 aa19.22■□□□□ 0.67
PNKP-210ENST00000597965 ZNF558Q96NG5 402 aa19.22■□□□□ 0.67
PNKP-210ENST00000597965 RIT2Q99578 217 aa19.22■□□□□ 0.67
PNKP-210ENST00000597965 C22orf23Q9BZE7 217 aa19.22■□□□□ 0.67
PNKP-210ENST00000597965 ENTPD7Q9NQZ7 604 aa19.22■□□□□ 0.67
PNKP-210ENST00000597965 DACT1Q9NYF0 836 aa19.22■□□□□ 0.67
PNKP-210ENST00000597965 NID2Q14112 1375 aa19.21■□□□□ 0.67
PNKP-210ENST00000597965 ZNF318Q5VUA4 2279 aa19.21■□□□□ 0.67
PNKP-210ENST00000597965 TMEM221A6NGB7 291 aa19.21■□□□□ 0.67
PNKP-210ENST00000597965 M0R296 226 aa19.21■□□□□ 0.67
PNKP-210ENST00000597965 FSCN2O14926 492 aa19.21■□□□□ 0.67
PNKP-210ENST00000597965 PER2O15055 1255 aa19.21■□□□□ 0.67
PNKP-210ENST00000597965 EOMESO95936 686 aa19.21■□□□□ 0.67
PNKP-210ENST00000597965 OATP04181 439 aa19.21■□□□□ 0.67
PNKP-210ENST00000597965 FGFR1P11362 822 aa19.21■□□□□ 0.67
PNKP-210ENST00000597965 JAK3P52333 1124 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms