RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TRIM50Q86XT4 487 aa22.98■■□□□ 1.27
PNKP-203ENST00000593946 IRF2BP1Q8IU81 584 aa22.98■■□□□ 1.27
PNKP-203ENST00000593946 FAM178BQ8IXR5 827 aa22.98■■□□□ 1.27
PNKP-203ENST00000593946 CSGALNACT2Q8N6G5 542 aa22.98■■□□□ 1.27
PNKP-203ENST00000593946 NOC3LQ8WTT2 800 aaKnown RBP22.98■■□□□ 1.27
PNKP-203ENST00000593946 GLG1Q92896 1179 aa22.98■■□□□ 1.27
PNKP-203ENST00000593946 FAM167AQ96KS9 214 aa22.98■■□□□ 1.27
PNKP-203ENST00000593946 CEP89Q96ST8 783 aa22.98■■□□□ 1.27
PNKP-203ENST00000593946 KCTD10Q9H3F6 313 aa22.98■■□□□ 1.27
PNKP-203ENST00000593946 ADCY6O43306 1168 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 GCNT3O95395 438 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 ZNF865P0CJ78 1059 aaPredicted RBP22.97■■□□□ 1.27
PNKP-203ENST00000593946 XRCC5P13010 732 aaKnown RBP22.97■■□□□ 1.27
PNKP-203ENST00000593946 PLS3P13797 630 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 CYP2C19P33261 490 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 SLC26A2P50443 739 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 TARBP2Q15633 366 aaKnown RBP22.97■■□□□ 1.27
PNKP-203ENST00000593946 MTERF2Q49AM1 385 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 APTXQ7Z2E3 356 aaKnown RBP22.97■■□□□ 1.27
PNKP-203ENST00000593946 ZNF720Q7Z2F6 126 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 MCPH1Q8NEM0 835 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 ZNF507Q8TCN5 953 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 SRRTQ9BXP5 876 aaKnown RBP22.97■■□□□ 1.27
PNKP-203ENST00000593946 SMARCAD1Q9H4L7 1026 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 GPRC5CQ9NQ84 441 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 XPNPEP1Q9NQW7 623 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 NRBP2Q9NSY0 501 aa22.97■■□□□ 1.27
PNKP-203ENST00000593946 MAPTP10636 758 aaKnown RBP22.96■■□□□ 1.27
PNKP-203ENST00000593946 NMT1P30419 496 aaKnown RBP22.96■■□□□ 1.27
PNKP-203ENST00000593946 HOXD13P35453 343 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 UBASH3AP57075 661 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 PRAMEF19Q5SWL8 479 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 NELFCDQ8IXH7 590 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 ATP6V0A4Q9HBG4 840 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 UBE4BO95155 1302 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 SP3Q02447 781 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 TNFAIP2Q03169 654 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 SPAG1Q07617 926 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 KNOP1Q1ED39 458 aaKnown RBP22.96■■□□□ 1.27
PNKP-203ENST00000593946 FAM102BQ5T8I3 360 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 AFG1LQ8WV93 481 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 BBXQ8WY36 941 aaPredicted RBP22.96■■□□□ 1.27
PNKP-203ENST00000593946 KIFAP3Q92845 792 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 TSG101Q99816 390 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 STRA6Q9BX79 667 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 DHX33Q9H6R0 707 aaKnown RBP22.96■■□□□ 1.27
PNKP-203ENST00000593946 PPME1Q9Y570 386 aa22.96■■□□□ 1.27
PNKP-203ENST00000593946 CBFA2T2O43439 604 aa22.95■■□□□ 1.26
PNKP-203ENST00000593946 PPP1R37O75864 691 aa22.95■■□□□ 1.26
PNKP-203ENST00000593946 PRPF6O94906 941 aaKnown RBP22.95■■□□□ 1.26
PNKP-203ENST00000593946 HOXD8P13378 290 aaPredicted RBP22.95■■□□□ 1.26
PNKP-203ENST00000593946 TCP11X2Q5H9J9 407 aa22.95■■□□□ 1.26
PNKP-203ENST00000593946 ATP8B4Q8TF62 1192 aa22.95■■□□□ 1.26
PNKP-203ENST00000593946 NAP1L5Q96NT1 182 aaPredicted RBP22.95■■□□□ 1.26
PNKP-203ENST00000593946 RNF186Q9NXI6 227 aa22.95■■□□□ 1.26
PNKP-203ENST00000593946 LIMA1Q9UHB6 759 aaKnown RBP22.95■■□□□ 1.26
PNKP-203ENST00000593946 KCNJ18B7U540 433 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 TRPA1O75762 1119 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 KCNJ12Q14500 433 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 EMC2Q15006 297 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 PLCB4Q15147 1175 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 PPP4R3CPQ6ZMV5 832 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 LRRC55Q6ZSA7 311 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 STXBP4Q6ZWJ1 553 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 C17orf75Q9HAS0 396 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 GABRQQ9UN88 632 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 GNEQ9Y223 722 aaKnown RBP22.94■■□□□ 1.26
PNKP-203ENST00000593946 LRRC10BA6NIK2 292 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 LGALS2P05162 132 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 EEF1GP26641 437 aaKnown RBP22.94■■□□□ 1.26
PNKP-203ENST00000593946 MARK3P27448 753 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 RFC5P40937 340 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 POLGP54098 1239 aaPredicted RBP22.94■■□□□ 1.26
PNKP-203ENST00000593946 RTP1P59025 263 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 HTRA3P83110 453 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 CAP1Q01518 475 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 ZC2HC1CQ53FD0 456 aaPredicted RBP22.94■■□□□ 1.26
PNKP-203ENST00000593946 OR6J1Q8NGC5 347 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 CTAGE1Q96RT6 745 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 ST6GALNAC4Q9H4F1 302 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 INTS13Q9NVM9 706 aa22.94■■□□□ 1.26
PNKP-203ENST00000593946 KAT6AQ92794 2004 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 A0A1B0GTH6 734 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 PPFIA4O75335 1185 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 FLT3LGP49771 235 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 KCNA1Q09470 495 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 ALCAMQ13740 583 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 KIF22Q14807 665 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 KRT31Q15323 416 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 EDRF1Q3B7T1 1238 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 ERAP1Q9NZ08 941 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 TRAF3IP3Q9Y228 551 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 PCDHB13Q9Y5F0 798 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 ZMYM2Q9UBW7 1377 aa22.93■■□□□ 1.26
PNKP-203ENST00000593946 EVPLQ92817 2033 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 ZBTB42B2RXF5 422 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 K7ENM7 598 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 PDXKO00764 312 aa22.92■■□□□ 1.26
PNKP-203ENST00000593946 FGFR1OPO95684 399 aaKnown RBP22.92■■□□□ 1.26
PNKP-203ENST00000593946 MMP3P08254 477 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms