RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 NEK9Q8TD19 979 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
LINC01140-210ENST00000590653 C18orf8Q96DM3 657 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 RSRC1Q96IZ7 334 aaKnown RBP11.86□□□□□ -0.51
LINC01140-210ENST00000590653 CALR3Q96L12 384 aaKnown RBP11.86□□□□□ -0.51
LINC01140-210ENST00000590653 KCNK9Q9NPC2 374 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.86□□□□□ -0.51
LINC01140-210ENST00000590653 PLCH1Q4KWH8 1693 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 MPHOSPH10O00566 681 aaKnown RBP11.86□□□□□ -0.51
LINC01140-210ENST00000590653 KCNQ2O43526 872 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 UPP2O95045 317 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 GCNT3O95395 438 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 PLCG2P16885 1265 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 MMP14P50281 582 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 MAP2K1Q02750 393 aaPredicted RBP11.86□□□□□ -0.51
LINC01140-210ENST00000590653 KCTD10Q9H3F6 313 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 SLITRK6Q9H5Y7 841 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 AGAP1Q9UPQ3 857 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 A8MUI8 341 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 PPIP5K2O43314 1243 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 C21orf2O43822 256 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 UBOX5O94941 541 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 ANP32DO95626 131 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 RFC4P35249 363 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 SNAP25P60880 206 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 SF3B3Q15393 1217 aaKnown RBP11.86□□□□□ -0.51
LINC01140-210ENST00000590653 GDAP1Q8TB36 358 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 CTNNBL1Q8WYA6 563 aaPredicted RBP11.86□□□□□ -0.51
LINC01140-210ENST00000590653 RAB17Q9H0T7 212 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 TOGARAM1Q9Y4F4 1720 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 IGSF9BQ9UPX0 1349 aa11.86□□□□□ -0.51
LINC01140-210ENST00000590653 GOLGA6L10A0A0M3HER8 536 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 C5orf60A6NFR6 353 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 EVI5O60447 810 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 DIAPH2O60879 1101 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 MED24O75448 989 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 KCNJ1P48048 391 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 PLS1Q14651 629 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 NAIF1Q69YI7 327 aaPredicted RBP11.85□□□□□ -0.51
LINC01140-210ENST00000590653 TRPM8Q7Z2W7 1104 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 KCNV2Q8TDN2 545 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 KDM4CQ9H3R0 1056 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 CNOT10Q9H9A5 744 aaKnown RBP11.85□□□□□ -0.51
LINC01140-210ENST00000590653 ZNF287Q9HBT7 754 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 TAS2R14Q9NYV8 317 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 TRIM33Q9UPN9 1127 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 MGRN1O60291 552 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 STAT1P42224 750 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 MICAL1Q8TDZ2 1067 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 ATP8B4Q8TF62 1192 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.85□□□□□ -0.51
LINC01140-210ENST00000590653 ARHGEF26Q96DR7 871 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 ERP44Q9BS26 406 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 PSTPIP2Q9H939 334 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 FGFR1OP2Q9NVK5 253 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 SUCLA2Q9P2R7 463 aaPredicted RBP11.85□□□□□ -0.51
LINC01140-210ENST00000590653 THRAP3Q9Y2W1 955 aaKnown RBP11.85□□□□□ -0.51
LINC01140-210ENST00000590653 CCDC169A6NNP5 214 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 USP17L10C9JJH3 530 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 ACSL3O95573 720 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 CREB1P16220 341 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 PRR16Q569H4 304 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 ARSHQ5FYA8 562 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 DCAF12L1Q5VU92 463 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 DPP8Q6V1X1 898 aaPredicted RBP11.85□□□□□ -0.51
LINC01140-210ENST00000590653 JAMLQ86YT9 394 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 SYCE1Q8N0S2 351 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 NEDD1Q8NHV4 660 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 AGAP11Q8TF27 550 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 FAM167BQ9BTA0 163 aa11.85□□□□□ -0.51
LINC01140-210ENST00000590653 TRIM6Q9C030 488 aaPredicted RBP11.85□□□□□ -0.51
LINC01140-210ENST00000590653 BZW2Q9Y6E2 419 aaKnown RBP11.85□□□□□ -0.51
LINC01140-210ENST00000590653 CHRM1P11229 460 aaPredicted RBP11.84□□□□□ -0.51
LINC01140-210ENST00000590653 MARCKSL1P49006 195 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 LONRF1Q17RB8 773 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 LACTB2Q53H82 288 aaPredicted RBP11.84□□□□□ -0.51
LINC01140-210ENST00000590653 ZNF746Q6NUN9 644 aaPredicted RBP11.84□□□□□ -0.51
LINC01140-210ENST00000590653 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 PALB2Q86YC2 1186 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 SPICE1Q8N0Z3 855 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 LNX1Q8TBB1 728 aaPredicted RBP11.84□□□□□ -0.51
LINC01140-210ENST00000590653 ALG3Q92685 438 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 ZNF317Q96PQ6 595 aaPredicted RBP11.84□□□□□ -0.51
LINC01140-210ENST00000590653 PABPC3Q9H361 631 aaKnown RBP11.84□□□□□ -0.51
LINC01140-210ENST00000590653 GOLGB1Q14789 3259 aaKnown RBP11.84□□□□□ -0.51
LINC01140-210ENST00000590653 TAL1P17542 331 aaPredicted RBP11.84□□□□□ -0.51
LINC01140-210ENST00000590653 KNOP1Q1ED39 458 aaKnown RBP11.84□□□□□ -0.51
LINC01140-210ENST00000590653 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 C10orf76Q5T2E6 689 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 ADGRF4Q8IZF3 695 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 TLCD1Q96CP7 247 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 REEP2Q9BRK0 252 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 NT5C3AQ9H0P0 336 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 THAP2Q9H0W7 228 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 CTTNBP2NLQ9P2B4 639 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 PCDHA2Q9Y5H9 948 aa11.84□□□□□ -0.51
LINC01140-210ENST00000590653 SRRM3A6NNA2 597 aaPredicted RBP11.83□□□□□ -0.52
LINC01140-210ENST00000590653 TCP11X1B4DZS4 312 aa11.83□□□□□ -0.52
LINC01140-210ENST00000590653 IGF2BP3O00425 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
LINC01140-210ENST00000590653 PPP1R11O60927 126 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms