RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 PCSK9Q8NBP7 692 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 SPATA20Q8TB22 786 aa18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 DDX12PQ92771 950 aa18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 ERCC4Q92889 916 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 DNAJC19Q96DA6 116 aa18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 MTG1Q9BT17 334 aaPredicted RBP18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 C11orf49Q9H6J7 331 aa18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 PDLIM7Q9NR12 457 aa18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 KCND2Q9NZV8 630 aa18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 PPME1Q9Y570 386 aa18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 PCDHA5Q9Y5H7 936 aa18.18■□□□□ 0.5
CDK5RAP3-228ENST00000583363 NPHP3-ACAD11A0A0J9YXS1 232 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 DLL1O00548 723 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 GIT2Q14161 759 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 MFSD10Q14728 455 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 MTERF2Q49AM1 385 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 ZNF484Q5JVG2 852 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 NT5DC1Q5TFE4 455 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 DYMQ7RTS9 669 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 ARRDC4Q8NCT1 418 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 TSEN34Q9BSV6 310 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 TUBE1Q9UJT0 475 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 TRPC6Q9Y210 931 aa18.17■□□□□ 0.5
CDK5RAP3-228ENST00000583363 A0A0C4DFX4 3053 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 ZBTB42B2RXF5 422 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 KLRC4O43908 158 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 DGAT1O75907 488 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 SMC2O95347 1197 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 ASGR1P07306 291 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 INSRRP14616 1297 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 GUCY2CP25092 1073 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 KIAA0753Q2KHM9 967 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 ZSCAN23Q3MJ62 389 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 CXCL17Q6UXB2 119 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 SMARCE1Q969G3 411 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 CCDC43Q96MW1 224 aaKnown RBP18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 KATNAL1Q9BW62 490 aa18.16■□□□□ 0.5
CDK5RAP3-228ENST00000583363 PVALEFA0A1B0GWK0 134 aa18.15■□□□□ 0.5
CDK5RAP3-228ENST00000583363 MYCNP04198 464 aaPredicted RBP18.15■□□□□ 0.5
CDK5RAP3-228ENST00000583363 RPN1P04843 607 aaKnown RBP18.15■□□□□ 0.5
CDK5RAP3-228ENST00000583363 KRT18P05783 430 aaKnown RBP18.15■□□□□ 0.5
CDK5RAP3-228ENST00000583363 MAGEA10P43363 369 aaPredicted RBP18.15■□□□□ 0.5
CDK5RAP3-228ENST00000583363 ASIC1P78348 528 aa18.15■□□□□ 0.5
CDK5RAP3-228ENST00000583363 GSDMAQ96QA5 445 aa18.15■□□□□ 0.5
CDK5RAP3-228ENST00000583363 TIPINQ9BVW5 301 aa18.15■□□□□ 0.5
CDK5RAP3-228ENST00000583363 DHX33Q9H6R0 707 aaKnown RBP18.15■□□□□ 0.5
CDK5RAP3-228ENST00000583363 LOXHD1Q8IVV2 1947 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MOXD2PA6NHM9 499 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 USO1O60763 962 aaKnown RBP18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MAFO75444 373 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 CABYRO75952 493 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 SMIM10L2AP0DMW4 78 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 SMIM10L2BP0DMW5 78 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 RFC5P40937 340 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ACLYP53396 1101 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 KCNB1Q14721 858 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 UNC13DQ70J99 1090 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 EXOC8Q8IYI6 725 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 REEP2Q9BRK0 252 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 GZF1Q9H116 711 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 POLD4Q9HCU8 107 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 COL1A2P08123 1366 aa18.14■□□□□ 0.49
CDK5RAP3-228ENST00000583363 IGKV6-21A0A0C4DH24 114 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 FRMD3A2A2Y4 597 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 RRN3P2A6NIE6 340 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 COL6A1P12109 1028 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 CACNB1Q02641 598 aaPredicted RBP18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 RAD51AP2Q09MP3 1159 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 PPFIA1Q13136 1202 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 GRIK4Q16099 956 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 KMT5BQ4FZB7 885 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 GPR153Q6NV75 609 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 Q7L0L9 218 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 CCDC65Q8IXS2 484 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MCPH1Q8NEM0 835 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 TRAPPC12Q8WVT3 735 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ATP6V0A4Q9HBG4 840 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 XPNPEP1Q9NQW7 623 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 PANK4Q9NVE7 773 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MAN1B1Q9UKM7 699 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 ODF2LQ9ULJ1 636 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 FRMPD3Q5JV73 1810 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 NRCAMQ92823 1304 aa18.13■□□□□ 0.49
CDK5RAP3-228ENST00000583363 SYCE3A1L190 88 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 RSPH10B2B2RC85 870 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MAGEB2O15479 319 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 HIP1RO75146 1068 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 RSPH10BP0C881 870 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 IDEP14735 1019 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 KLRC1P26715 233 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 POLGP54098 1239 aaPredicted RBP18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 CHMP4BP1P59074 171 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 IGBP1P78318 339 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 TBC1D8BQ0IIM8 1120 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MAPK7Q13164 816 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 EMC2Q15006 297 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 NBPF20Q3BBV1 942 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 LRIT3Q3SXY7 679 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MARCH8Q5T0T0 291 aa18.12■□□□□ 0.49
CDK5RAP3-228ENST00000583363 MTHFD1LQ6UB35 978 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms