RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CAPN8A6NHC0 703 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 RASA4BC9J798 803 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 RASA4O43374 803 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 C4BPAP04003 597 aaKnown RBP7.09□□□□□ -1.27
SCFD1-208ENST00000553278 LPLP06858 475 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 PEX2P28328 305 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 FXR1P51114 621 aaKnown RBP eCLIP7.09□□□□□ -1.27
SCFD1-208ENST00000553278 PDCD2Q16342 344 aaPredicted RBP7.09□□□□□ -1.27
SCFD1-208ENST00000553278 ANO4Q32M45 955 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 ANO6Q4KMQ2 910 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 EMC4Q5J8M3 183 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 NPNTQ6UXI9 565 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 STK11IPQ8N1F8 1099 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 KRT78Q8N1N4 520 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 TEX19Q8NA77 164 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 PHOSPHO1Q8TCT1 267 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 MFSD14AQ96MC6 490 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 BHMT2Q9H2M3 363 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 ARFGAP3Q9NP61 516 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 STOML1Q9UBI4 398 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 ZNF69Q9UC07 566 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 DPP7Q9UHL4 492 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 LRCH1Q9Y2L9 728 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 RAXQ9Y2V3 346 aa7.09□□□□□ -1.27
SCFD1-208ENST00000553278 FAM90A27PA6NNH2 459 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 FADS2P1A8MWK0 482 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 HGSO14964 777 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-208ENST00000553278 SLC27A2O14975 620 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 APOL3O95236 402 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 ESR1P03372 595 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 HTR1BP28222 390 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 IL12RB1P42701 662 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 SARSP49591 514 aaKnown RBP7.08□□□□□ -1.28
SCFD1-208ENST00000553278 TUSC3Q13454 348 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 HSF5Q4G112 596 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-208ENST00000553278 TTC38Q5R3I4 469 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 DAAM2Q86T65 1068 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 DPP9Q86TI2 863 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 TRIM48Q8IWZ4 208 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 ATXN2LQ8WWM7 1075 aaKnown RBP7.08□□□□□ -1.28
SCFD1-208ENST00000553278 RSAD2Q8WXG1 361 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 ERCC4Q92889 916 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-208ENST00000553278 MAP6Q96JE9 813 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 TUBGCP5Q96RT8 1024 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 JMJD8Q96S16 334 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 METTL22Q9BUU2 404 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-208ENST00000553278 APOL5Q9BWW9 433 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 ACE2Q9BYF1 805 aaPredicted RBP7.08□□□□□ -1.28
SCFD1-208ENST00000553278 KCTD10Q9H3F6 313 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 FNIP2Q9P278 1114 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 ZC3H7BQ9UGR2 993 aaKnown RBP7.08□□□□□ -1.28
SCFD1-208ENST00000553278 SNX11Q9Y5W9 270 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 NUMBLQ9Y6R0 609 aa7.08□□□□□ -1.28
SCFD1-208ENST00000553278 ELL2O00472 640 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-208ENST00000553278 PRPF6O94906 941 aaKnown RBP7.07□□□□□ -1.28
SCFD1-208ENST00000553278 CCT5P48643 541 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 CEBPAP49715 358 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-208ENST00000553278 AGFG1P52594 562 aaKnown RBP7.07□□□□□ -1.28
SCFD1-208ENST00000553278 LGALS4P56470 323 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 HERVK_113P62684 666 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 SPIDRQ14159 915 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 MAPRE1Q15691 268 aaKnown RBP7.07□□□□□ -1.28
SCFD1-208ENST00000553278 PAN2Q504Q3 1202 aaKnown RBP7.07□□□□□ -1.28
SCFD1-208ENST00000553278 ZBTB41Q5SVQ8 909 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 SAPCD2Q86UD0 394 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 SLCO6A1Q86UG4 719 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 SHISA5Q8N114 240 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 NME8Q8N427 588 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 TMEM151AQ8N4L1 468 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 NKAPQ8N5F7 415 aaKnown RBP7.07□□□□□ -1.28
SCFD1-208ENST00000553278 MARCH10Q8NA82 808 aaPredicted RBP7.07□□□□□ -1.28
SCFD1-208ENST00000553278 HIPK4Q8NE63 616 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 LRTOMTQ8WZ04 291 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 GBP4Q96PP9 640 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 MYL10Q9BUA6 226 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 KMT5AQ9NQR1 393 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 MYOTQ9UBF9 498 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 SWAP70Q9UH65 585 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 PLAGL2Q9UPG8 496 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 U3KQE9 123 aa7.07□□□□□ -1.28
SCFD1-208ENST00000553278 PITPNM2Q9BZ72 1349 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 TMEM265A0A087WTH1 108 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 hCG_1642624A0A1W2PR95 340 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 CCDC154A6NI56 674 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 TADA3O75528 432 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 ALDH2P05091 517 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 F13BP05160 661 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 SLC6A11P48066 632 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 TRIM14Q14142 442 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 CNN3Q15417 329 aaKnown RBP7.06□□□□□ -1.28
SCFD1-208ENST00000553278 RBM12BQ8IXT5 1001 aaKnown RBP7.06□□□□□ -1.28
SCFD1-208ENST00000553278 SPATA5Q8NB90 893 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 ASB15Q8WXK1 588 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 CCT6BQ92526 530 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 TRIM63Q969Q1 353 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 SCARF2Q96GP6 870 aaPredicted RBP7.06□□□□□ -1.28
SCFD1-208ENST00000553278 HHIPL1Q96JK4 782 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 RIPOR3Q96MK2 946 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 CGRRF1Q99675 332 aa7.06□□□□□ -1.28
SCFD1-208ENST00000553278 CRB3Q9BUF7 120 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms