RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 ZBTB38Q8NAP3 1195 aaPredicted RBP5.24□□□□□ -1.57
YBX3-205ENST00000536107 GRAPLQ8TC17 118 aaPredicted RBP5.24□□□□□ -1.57
YBX3-205ENST00000536107 DEFB129Q9H1M3 183 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 FAN1Q9Y2M0 1017 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 USP16Q9Y5T5 823 aa5.24□□□□□ -1.57
YBX3-205ENST00000536107 UNCXA6NJT0 531 aa5.23□□□□□ -1.57
YBX3-205ENST00000536107 CHURC1-FNTBB4DL54 471 aa5.23□□□□□ -1.57
YBX3-205ENST00000536107 WNT10BO00744 389 aa5.23□□□□□ -1.57
YBX3-205ENST00000536107 SRGAP3O43295 1099 aa5.23□□□□□ -1.57
YBX3-205ENST00000536107 KRT37O76014 449 aa5.23□□□□□ -1.57
YBX3-205ENST00000536107 CHMP4BP1P59074 171 aa5.23□□□□□ -1.57
YBX3-205ENST00000536107 SMAD3P84022 425 aaKnown RBP5.23□□□□□ -1.57
YBX3-205ENST00000536107 SHHQ15465 462 aa5.23□□□□□ -1.57
YBX3-205ENST00000536107 DIEXFQ68CQ4 756 aaKnown RBP5.23□□□□□ -1.57
YBX3-205ENST00000536107 PAQR3Q6TCH7 311 aa5.23□□□□□ -1.57
YBX3-205ENST00000536107 ZNF761Q86XN6 746 aaPredicted RBP5.23□□□□□ -1.57
YBX3-205ENST00000536107 SSBP3Q9BWW4 388 aaPredicted RBP5.23□□□□□ -1.57
YBX3-205ENST00000536107 IMPACTQ9P2X3 320 aa5.23□□□□□ -1.57
YBX3-205ENST00000536107 POLLQ9UGP5 575 aa5.23□□□□□ -1.57
YBX3-205ENST00000536107 BDP1A6H8Y1 2624 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 SOWAHDA6NJG2 315 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 CYBBP04839 570 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 SNRPA1P09661 255 aaKnown RBP5.22□□□□□ -1.57
YBX3-205ENST00000536107 NCAM1P13591 858 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 CTGFP29279 349 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 GPSM2P81274 684 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 CDSNQ15517 529 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 MAP3K11Q16584 847 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 AAK1Q2M2I8 961 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 CCDC84Q86UT8 332 aaPredicted RBP5.22□□□□□ -1.57
YBX3-205ENST00000536107 PHACTR4Q8IZ21 702 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 TBC1D16Q8TBP0 767 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 JARID2Q92833 1246 aaPredicted RBP5.22□□□□□ -1.57
YBX3-205ENST00000536107 KISS1RQ969F8 398 aaPredicted RBP5.22□□□□□ -1.57
YBX3-205ENST00000536107 FRMD6Q96NE9 622 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 KIF2CQ99661 725 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 ZNF747Q9BV97 191 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 UTP14AQ9BVJ6 771 aaKnown RBP5.22□□□□□ -1.57
YBX3-205ENST00000536107 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.22□□□□□ -1.57
YBX3-205ENST00000536107 REV1Q9UBZ9 1251 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 POLR2AP24928 1970 aaKnown RBP5.22□□□□□ -1.57
YBX3-205ENST00000536107 UBN2Q6ZU65 1347 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 ADGRA2Q96PE1 1338 aa5.22□□□□□ -1.57
YBX3-205ENST00000536107 ERVV-1B6SEH8 477 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 BTBD19C9JJ37 291 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 KCNQ3O43525 872 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 UFL1O94874 794 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 PRAMEF1O95521 474 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 NTSR2O95665 410 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 DBHP09172 617 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 CETPP11597 493 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 GBP1P32455 592 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 SARSP49591 514 aaKnown RBP5.21□□□□□ -1.58
YBX3-205ENST00000536107 FLT3LGP49771 235 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 MTHFSDQ2M296 383 aaKnown RBP5.21□□□□□ -1.58
YBX3-205ENST00000536107 C9orf50Q5SZB4 431 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 C17orf99Q6UX52 265 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 CCDC82Q8N4S0 544 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 JMJD8Q96S16 334 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 GMLQ99445 158 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 VPS11Q9H270 941 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 NTMQ9P121 344 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 KLHL3Q9UH77 587 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 GABRQQ9UN88 632 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 PLA2G2DQ9UNK4 145 aa5.21□□□□□ -1.58
YBX3-205ENST00000536107 KDM3BQ7LBC6 1761 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 RGS13O14921 159 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 SIGLEC6O43699 453 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 HMOX1P09601 288 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 TGM1P22735 817 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 MAPK1P28482 360 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 ATP2B2Q01814 1243 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 TFF2Q03403 129 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 MVKQ03426 396 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 SNW1Q13573 536 aaKnown RBP5.2□□□□□ -1.58
YBX3-205ENST00000536107 LRRC26Q2I0M4 334 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 PARP10Q53GL7 1025 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 SLC10A5Q5PT55 438 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 AKNAD1Q5T1N1 836 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 NBPF12Q5TAG4 269 aaPredicted RBP5.2□□□□□ -1.58
YBX3-205ENST00000536107 B3GNT8Q7Z7M8 397 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 MXD3Q9BW11 206 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 VEZTQ9HBM0 779 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 ST6GALNAC2Q9UJ37 374 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 RRP7AQ9Y3A4 280 aaKnown RBP5.2□□□□□ -1.58
YBX3-205ENST00000536107 HCFC2Q9Y5Z7 792 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 MAP3K15Q6ZN16 1313 aa5.2□□□□□ -1.58
YBX3-205ENST00000536107 PKD1L2Q7Z442 2459 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 IBTKQ9P2D0 1353 aaPredicted RBP5.19□□□□□ -1.58
YBX3-205ENST00000536107 TNPO2O14787 897 aaKnown RBP5.19□□□□□ -1.58
YBX3-205ENST00000536107 MYO1BO43795 1136 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 ZNF205O95201 554 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 BPNT1O95861 308 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 U2AF1L5P0DN76 240 aaPredicted RBP5.19□□□□□ -1.58
YBX3-205ENST00000536107 RLBP1P12271 317 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 MYL6BP14649 208 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 ITGB8P26012 769 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 KCNQ1P51787 676 aa5.19□□□□□ -1.58
YBX3-205ENST00000536107 U2AF1Q01081 240 aaKnown RBP eCLIP5.19□□□□□ -1.58
YBX3-205ENST00000536107 SNAPC2Q13487 334 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms