RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 AP5M1Q9H0R1 490 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 POLD4Q9HCU8 107 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 RWDD2AQ9UIY3 292 aa20.49■□□□□ 0.87
SMPD1-208ENST00000533123 EMSYQ7Z589 1322 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 A6NJR5 290 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 DUSP11O75319 330 aaKnown RBP20.48■□□□□ 0.87
SMPD1-208ENST00000533123 OATP04181 439 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 INHAP05111 366 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 CDK11BP21127 795 aaKnown RBP20.48■□□□□ 0.87
SMPD1-208ENST00000533123 STK4Q13043 487 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 ARID5BQ14865 1188 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 OTUD6AQ7L8S5 288 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 PLPPR4Q7Z2D5 763 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 SMARCAD1Q9H4L7 1026 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 BMP2KQ9NSY1 1161 aaPredicted RBP20.48■□□□□ 0.87
SMPD1-208ENST00000533123 ANKEF1Q9NU02 776 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 INTS13Q9NVM9 706 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 Q9Y3F1 56 aa20.48■□□□□ 0.87
SMPD1-208ENST00000533123 TRIM49BA6NDI0 452 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 KRT18P05783 430 aaKnown RBP20.47■□□□□ 0.87
SMPD1-208ENST00000533123 BEX3Q00994 111 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 LRMPQ12912 555 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 DGKDQ16760 1214 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 PADI6Q6TGC4 694 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 DNAJC19Q96DA6 116 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 CEP170P1Q96L14 293 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 PTPN22Q9Y2R2 807 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 DNAH12Q6ZR08 3092 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 IDEP14735 1019 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 PMS1P54277 932 aaKnown RBP20.47■□□□□ 0.87
SMPD1-208ENST00000533123 C1orf186Q6ZWK4 172 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 TMC6Q7Z403 805 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 SH3TC2Q8TF17 1288 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 C16orf70Q9BSU1 422 aa20.47■□□□□ 0.87
SMPD1-208ENST00000533123 RARBP10826 455 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 HSPA8P11142 646 aaKnown RBP20.46■□□□□ 0.87
SMPD1-208ENST00000533123 CDKAL1Q5VV42 579 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 KIAA0895Q8NCT3 520 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 CCDC47Q96A33 483 aaKnown RBP20.46■□□□□ 0.87
SMPD1-208ENST00000533123 PGK1P00558 417 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 TPM3P06753 285 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 C6orf222P0C671 652 aaPredicted RBP20.46■□□□□ 0.87
SMPD1-208ENST00000533123 HOXD8P13378 290 aaPredicted RBP20.46■□□□□ 0.87
SMPD1-208ENST00000533123 MTERF2Q49AM1 385 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 UNC13DQ70J99 1090 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 CACTINQ8WUQ7 758 aaKnown RBP20.46■□□□□ 0.87
SMPD1-208ENST00000533123 REEP2Q9BRK0 252 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 RNPEPQ9H4A4 650 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 CYP26B1Q9NR63 512 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 NRBP2Q9NSY0 501 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 ERAP1Q9NZ08 941 aa20.46■□□□□ 0.87
SMPD1-208ENST00000533123 LOXHD1Q8IVV2 1947 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 MYADML2A6NDP7 307 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 USO1O60763 962 aaKnown RBP20.45■□□□□ 0.86
SMPD1-208ENST00000533123 CPT1AP50416 773 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 GIT2Q14161 759 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 PLCB4Q15147 1175 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 FSCN1Q16658 493 aaKnown RBP20.45■□□□□ 0.86
SMPD1-208ENST00000533123 CNNM4Q6P4Q7 775 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 MAEAQ7L5Y9 396 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 SLC39A2Q9NP94 309 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 PYCARDQ9ULZ3 195 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 H3BRB1 525 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 CBFA2T2O43439 604 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 SLC26A2P50443 739 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 LBX1P52954 281 aa20.45■□□□□ 0.86
SMPD1-208ENST00000533123 TPD52L1Q16890 204 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-208ENST00000533123 C17orf53Q8N3J3 647 aaPredicted RBP20.45■□□□□ 0.86
SMPD1-208ENST00000533123 TUT1Q9H6E5 874 aaKnown RBP20.45■□□□□ 0.86
SMPD1-208ENST00000533123 PVALEFA0A1B0GWK0 134 aa20.44■□□□□ 0.86
SMPD1-208ENST00000533123 RSPH10B2B2RC85 870 aa20.44■□□□□ 0.86
SMPD1-208ENST00000533123 RSPH10BP0C881 870 aa20.44■□□□□ 0.86
SMPD1-208ENST00000533123 HSPA1AP0DMV8 641 aaKnown RBP20.44■□□□□ 0.86
SMPD1-208ENST00000533123 HSPA1BP0DMV9 641 aaKnown RBP20.44■□□□□ 0.86
SMPD1-208ENST00000533123 GJA9P57773 515 aa20.44■□□□□ 0.86
SMPD1-208ENST00000533123 BRDTQ58F21 947 aaPredicted RBP20.44■□□□□ 0.86
SMPD1-208ENST00000533123 APTXQ7Z2E3 356 aaKnown RBP20.44■□□□□ 0.86
SMPD1-208ENST00000533123 ATP8B4Q8TF62 1192 aa20.44■□□□□ 0.86
SMPD1-208ENST00000533123 BBXQ8WY36 941 aaPredicted RBP20.44■□□□□ 0.86
SMPD1-208ENST00000533123 NIFKQ9BYG3 293 aaKnown RBP20.44■□□□□ 0.86
SMPD1-208ENST00000533123 ZHX3Q9H4I2 956 aa20.44■□□□□ 0.86
SMPD1-208ENST00000533123 TRPC6Q9Y210 931 aa20.44■□□□□ 0.86
SMPD1-208ENST00000533123 SFI1A8K8P3 1242 aa20.43■□□□□ 0.86
SMPD1-208ENST00000533123 STIM1Q13586 685 aa20.43■□□□□ 0.86
SMPD1-208ENST00000533123 GNASQ5JWF2 1037 aa20.43■□□□□ 0.86
SMPD1-208ENST00000533123 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-208ENST00000533123 FAM167AQ96KS9 214 aa20.43■□□□□ 0.86
SMPD1-208ENST00000533123 HMX1Q9NP08 348 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-208ENST00000533123 XPNPEP3Q9NQH7 507 aa20.43■□□□□ 0.86
SMPD1-208ENST00000533123 PANK4Q9NVE7 773 aa20.43■□□□□ 0.86
SMPD1-208ENST00000533123 KCND2Q9NZV8 630 aa20.43■□□□□ 0.86
SMPD1-208ENST00000533123 PSMA7O14818 248 aa20.43■□□□□ 0.86
SMPD1-208ENST00000533123 MYCNP04198 464 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-208ENST00000533123 DDX20Q9UHI6 824 aaKnown RBP20.43■□□□□ 0.86
SMPD1-208ENST00000533123 ZNF215Q9UL58 517 aaPredicted RBP20.43■□□□□ 0.86
SMPD1-208ENST00000533123 MYCP01106 439 aaPredicted RBP20.42■□□□□ 0.86
SMPD1-208ENST00000533123 MYL3P08590 195 aa20.42■□□□□ 0.86
SMPD1-208ENST00000533123 CHMP4BP1P59074 171 aa20.42■□□□□ 0.86
SMPD1-208ENST00000533123 EHHADHQ08426 723 aa20.42■□□□□ 0.86
SMPD1-208ENST00000533123 GLIS3Q8NEA6 775 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms