RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 PRLP01236 227 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 TRIM27P14373 513 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 MC4RP32245 332 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 FXR1P51114 621 aaKnown RBP eCLIP3.88□□□□□ -1.79
CD44-234ENST00000531873 PURAQ00577 322 aaKnown RBP3.88□□□□□ -1.79
CD44-234ENST00000531873 GRIN1Q05586 938 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 ZNF267Q14586 743 aaPredicted RBP3.88□□□□□ -1.79
CD44-234ENST00000531873 ACAP2Q15057 778 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.88□□□□□ -1.79
CD44-234ENST00000531873 PAN2Q504Q3 1202 aaKnown RBP3.88□□□□□ -1.79
CD44-234ENST00000531873 SLC23A3Q6PIS1 610 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 UNQ6494/PRO21346Q6UXR6 183 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 KSR2Q6VAB6 950 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 TTLL7Q6ZT98 887 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 CATIPQ7Z7H3 387 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 CABP7Q86V35 215 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 SPPL2CQ8IUH8 684 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 PHYKPLQ8IUZ5 450 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 LYSMD2Q8IV50 215 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 SLC41A1Q8IVJ1 513 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 OXR1Q8N573 874 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 SSH1Q8WYL5 1049 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 EAF2Q96CJ1 260 aaPredicted RBP3.88□□□□□ -1.79
CD44-234ENST00000531873 GBP4Q96PP9 640 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 TAAR9Q96RI9 348 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 PSMD1Q99460 953 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 ANO3Q9BYT9 981 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 ZNF700Q9H0M5 742 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 AP5M1Q9H0R1 490 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 NMRK2Q9NPI5 230 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 GPR160Q9UJ42 338 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 EDARQ9UNE0 448 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 ASB1Q9Y576 335 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 GPR45Q9Y5Y3 372 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 HCFC2Q9Y5Z7 792 aa3.88□□□□□ -1.79
CD44-234ENST00000531873 UBA6A0AVT1 1052 aaPredicted RBP3.87□□□□□ -1.79
CD44-234ENST00000531873 ZC3H12DA2A288 527 aaKnown RBP3.87□□□□□ -1.79
CD44-234ENST00000531873 ZNF503-AS2A6NEH8 195 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 A6NNZ2 444 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 GOLGA6L22H0YM25 854 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 ERC2O15083 957 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 NDUFS2O75306 463 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 PRPF6O94906 941 aaKnown RBP3.87□□□□□ -1.79
CD44-234ENST00000531873 LPLP06858 475 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 FAHP16930 419 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 VCAM1P19320 739 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 GDNFP39905 211 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 ERVFRD-1P60508 538 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 ALDH6A1Q02252 535 aaKnown RBP3.87□□□□□ -1.79
CD44-234ENST00000531873 ADCY1Q08828 1119 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 BIRC2Q13490 618 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 TRIM25Q14258 630 aaKnown RBP3.87□□□□□ -1.79
CD44-234ENST00000531873 UGT8Q16880 541 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 CCDC62Q6P9F0 684 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 ESPNLQ6ZVH7 1005 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 KANSL1Q7Z3B3 1105 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 MILR1Q7Z6M3 343 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 ZSWIM9Q86XI8 627 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 PROSER1Q86XN7 944 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 NME9Q86XW9 330 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 MIB1Q86YT6 1006 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 TRIM48Q8IWZ4 208 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 SIRT2Q8IXJ6 389 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 LILRA2Q8N149 483 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 SVIPQ8NHG7 77 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 MORC4Q8TE76 937 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 TSPEARQ8WU66 669 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 ERCC4Q92889 916 aaPredicted RBP3.87□□□□□ -1.79
CD44-234ENST00000531873 SLC2A13Q96QE2 648 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 MYL10Q9BUA6 226 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 SARGQ9BW04 601 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 GTPBP4Q9BZE4 634 aaKnown RBP3.87□□□□□ -1.79
CD44-234ENST00000531873 MYH16Q9H6N6 1097 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 PLA2G2DQ9UNK4 145 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 PTPN22Q9Y2R2 807 aa3.87□□□□□ -1.79
CD44-234ENST00000531873 A0A1W2PQJ5 194 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 CYBBP04839 570 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 PFKMP08237 780 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 CELA3BP08861 270 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 PNLIPP16233 465 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 HSPA6P17066 643 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 SDHBP21912 280 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 AKAP5P24588 427 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 RGS3P49796 1198 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 USP14P54578 494 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 ADKP55263 362 aaKnown RBP3.86□□□□□ -1.79
CD44-234ENST00000531873 MRPS9P82933 396 aaKnown RBP3.86□□□□□ -1.79
CD44-234ENST00000531873 DBPQ10586 325 aaPredicted RBP3.86□□□□□ -1.79
CD44-234ENST00000531873 MUM1Q2TAK8 710 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 IFIT1BQ5T764 474 aaKnown RBP3.86□□□□□ -1.79
CD44-234ENST00000531873 GORABQ5T7V8 394 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 CD276Q5ZPR3 534 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 KIAA1841Q6NSI8 718 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 PAQR3Q6TCH7 311 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 RPTNQ6XPR3 784 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 SAMD3Q8N6K7 520 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 HIPK4Q8NE63 616 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 SLC35G2Q8TBE7 412 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 FBXO41Q8TF61 875 aa3.86□□□□□ -1.79
CD44-234ENST00000531873 TSPAN17Q96FV3 270 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms