RNA–Protein interactions for RNA: ENST00000528439.5

RPS3-210, Transcript of ribosomal protein S3, human

TSL 3

Gene RPS3, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS3-210	ENST00000528439	GUF1	Q8N442	669 aa	Known RBP	11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	OR6J1	Q8NGC5	347 aa		11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	SCFD1	Q8WVM8	642 aa		11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	BSND	Q8WZ55	320 aa		11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	CEP170P1	Q96L14	293 aa		11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	DUSP9	Q99956	384 aa	Known RBP	11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	NIFK	Q9BYG3	293 aa	Known RBP	11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	IKZF4	Q9H2S9	585 aa		11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	OLFML3	Q9NRN5	406 aa		11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	SAMSN1	Q9NSI8	373 aa	Known RBP	11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	HTT	P42858	3142 aa		11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	ZMYM2	Q9UBW7	1377 aa		11.12	□□□□□ -0.63
RPS3-210	ENST00000528439	SMTNL1	A8MU46	457 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	PSMA7	O14818	248 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	NKRF	O15226	690 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	FKTN	O75072	461 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	PPP1R37	O75864	691 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	HSPA8	P11142	646 aa	Known RBP	11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	ELN	P15502	786 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	GAP43	P17677	238 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	CCNE1	P24864	410 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	NMT1	P30419	496 aa	Known RBP	11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	KCNA1	Q09470	495 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	EMC2	Q15006	297 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	SPATA1	Q5VX52	437 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	SARM1	Q6SZW1	724 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	OTUD6A	Q7L8S5	288 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	PLPPR4	Q7Z2D5	763 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	TLK2	Q86UE8	772 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	NELFCD	Q8IXH7	590 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	ATP8B4	Q8TF62	1192 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	GLG1	Q92896	1179 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	P2RX5	Q93086	422 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	ZBTB10	Q96DT7	871 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	DHTKD1	Q96HY7	919 aa	Predicted RBP	11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	CCDC43	Q96MW1	224 aa	Known RBP	11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	C16orf70	Q9BSU1	422 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	AZI2	Q9H6S1	392 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	PARVG	Q9HBI0	331 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	SRRD	Q9UH36	339 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	COL4A3BP	Q9Y5P4	624 aa		11.11	□□□□□ -0.63
RPS3-210	ENST00000528439	SI	P14410	1827 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	MYADML2	A6NDP7	307 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	ADCY5	O95622	1261 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	PLS3	P13797	630 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	ZNF75D	P51815	510 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	STIM1	Q13586	685 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	KIF22	Q14807	665 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	BMT2	Q1RMZ1	405 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	ODR4	Q5SWX8	454 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	FAM102B	Q5T8I3	360 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	ANKRD40	Q6AI12	368 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	CENPP	Q6IPU0	288 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	APTX	Q7Z2E3	356 aa	Known RBP	11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	IRF2BP1	Q8IU81	584 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	KSR1	Q8IVT5	923 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	MYOCD	Q8IZQ8	938 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	MYCT1	Q8N699	235 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	TRAPPC12	Q8WVT3	735 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	ERO1A	Q96HE7	468 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	PDLIM2	Q96JY6	352 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	KIFC3	Q9BVG8	833 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	TIPIN	Q9BVW5	301 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	STRA6	Q9BX79	667 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	GTPBP4	Q9BZE4	634 aa	Known RBP	11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	KCTD10	Q9H3F6	313 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	RNPEP	Q9H4A4	650 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	DHX33	Q9H6R0	707 aa	Known RBP	11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	MRPL44	Q9H9J2	332 aa	Known RBP	11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	ATP6V0A4	Q9HBG4	840 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	SEL1L	Q9UBV2	794 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	PCNT	O95613	3336 aa		11.1	□□□□□ -0.63
RPS3-210	ENST00000528439	ADGRA3	Q8IWK6	1321 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439		A6NJR5	290 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	DYNC1LI2	O43237	492 aa	Predicted RBP	11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	DGAT1	O75907	488 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	PRPF6	O94906	941 aa	Known RBP	11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	GCNT3	O95395	438 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	PPP1R2	P41236	205 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	LBX1	P52954	281 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	POLG	P54098	1239 aa	Predicted RBP	11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	PLCB2	Q00722	1185 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	CACNB2	Q08289	660 aa	Predicted RBP	11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	DRP2	Q13474	957 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	MFSD14C	Q5VZR4	134 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	LRRC55	Q6ZSA7	311 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	FAM178B	Q8IXR5	827 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	ASAP3	Q8TDY4	903 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	BBX	Q8WY36	941 aa	Predicted RBP	11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	TMEM143	Q96AN5	459 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	EEF2KMT	Q96G04	330 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	FAM167A	Q96KS9	214 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	DRC1	Q96MC2	740 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	SMARCAD1	Q9H4L7	1026 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	INTS13	Q9NVM9	706 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	NRBP1	Q9UHY1	535 aa		11.09	□□□□□ -0.63
RPS3-210	ENST00000528439	FAM184B	Q9ULE4	1060 aa		11.09	□□□□□ -0.63

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