RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 C1orf186Q6ZWK4 172 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 GRPEL1Q9HAV7 217 aa10.35□□□□□ -0.75
SDCBP-212ENST00000523483 LRRIQ4A6NIV6 560 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 K7ENM7 598 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 NKRFO15226 690 aaKnown RBP eCLIP10.34□□□□□ -0.753e-7■■■■□ 24.1
SDCBP-212ENST00000523483 PRPF6O94906 941 aaKnown RBP10.34□□□□□ -0.75
SDCBP-212ENST00000523483 ATG7O95352 703 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 MYL1P05976 194 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 GJB1P08034 283 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 SARSP49591 514 aaKnown RBP10.34□□□□□ -0.75
SDCBP-212ENST00000523483 TMEM62Q0P6H9 643 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 EMC2Q15006 297 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 ZC2HC1CQ53FD0 456 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-212ENST00000523483 ATP8B4Q8TF62 1192 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 ATP6V0A4Q9HBG4 840 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 SETD4Q9NVD3 440 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 DACH1Q9UI36 760 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 GNEQ9Y223 722 aaKnown RBP10.34□□□□□ -0.75
SDCBP-212ENST00000523483 SRGAP2CP0DJJ0 459 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 CDK11BP21127 795 aaKnown RBP10.34□□□□□ -0.75
SDCBP-212ENST00000523483 CLCN3P51790 818 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 PPFIA1Q13136 1202 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 DRP2Q13474 957 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 NELFBQ8WX92 580 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 NLRP4Q96MN2 994 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 CFHR5Q9BXR6 569 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 POLR3FQ9H1D9 316 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-212ENST00000523483 HMX1Q9NP08 348 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-212ENST00000523483 ANKEF1Q9NU02 776 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 LARSQ9P2J5 1176 aaKnown RBP10.34□□□□□ -0.75
SDCBP-212ENST00000523483 RBM47A0AV96 593 aaKnown RBP10.34□□□□□ -0.75
SDCBP-212ENST00000523483 PSMA7O14818 248 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 SLC16A4O15374 487 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 DGAT1O75907 488 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 CASP5P51878 434 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 SYCP3Q8IZU3 236 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 DNAJC5GQ8N7S2 189 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 MLKLQ8NB16 471 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 KIAA0895Q8NCT3 520 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 BBXQ8WY36 941 aaPredicted RBP10.34□□□□□ -0.75
SDCBP-212ENST00000523483 FAM167AQ96KS9 214 aa10.34□□□□□ -0.75
SDCBP-212ENST00000523483 SYNRGQ9UMZ2 1314 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 MYH9P35579 1960 aaKnown RBP10.33□□□□□ -0.76
SDCBP-212ENST00000523483 DUSP11O75319 330 aaKnown RBP10.33□□□□□ -0.76
SDCBP-212ENST00000523483 RHOBTB3O94955 611 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 MYBP10242 640 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 RHPN2Q8IUC4 686 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 TRIML1Q8N9V2 468 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 RNF208Q9H0X6 261 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 IKZF4Q9H2S9 585 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 DBR1Q9UK59 544 aaKnown RBP10.33□□□□□ -0.76
SDCBP-212ENST00000523483 AKT3Q9Y243 479 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 USP20Q9Y2K6 914 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 HSPA1AP0DMV8 641 aaKnown RBP10.33□□□□□ -0.76
SDCBP-212ENST00000523483 HSPA1BP0DMV9 641 aaKnown RBP10.33□□□□□ -0.76
SDCBP-212ENST00000523483 KCNA1Q09470 495 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 PAK1Q13153 545 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 DMP1Q13316 513 aaPredicted RBP10.33□□□□□ -0.76
SDCBP-212ENST00000523483 MTFR1Q15390 333 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 TMEM132AQ24JP5 1023 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 NT5DC1Q5TFE4 455 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 SLAIN1Q8ND83 568 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 SPATA20Q8TB22 786 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 ANP32BQ92688 251 aaKnown RBP10.33□□□□□ -0.76
SDCBP-212ENST00000523483 C16orf70Q9BSU1 422 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 NFE2L3Q9Y4A8 694 aa10.33□□□□□ -0.76
SDCBP-212ENST00000523483 PVALEFA0A1B0GWK0 134 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 CSDE1O75534 798 aaKnown RBP10.32□□□□□ -0.76
SDCBP-212ENST00000523483 LYPLA2O95372 231 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 MUTP22033 750 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 IRF5Q13568 498 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 MYOCDQ8IZQ8 938 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 C7orf31Q8N865 590 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 IFT74Q96LB3 600 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 DRC1Q96MC2 740 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 DEFB118Q96PH6 123 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 IGKV6D-21A0A0A0MT36 114 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 A6NJR5 290 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 SLC26A4O43511 780 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 HBP1O60381 514 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 IBSPP21815 317 aaPredicted RBP10.32□□□□□ -0.76
SDCBP-212ENST00000523483 KLRC1P26715 233 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 EFCAB12Q6NXP0 572 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 PLPPR4Q7Z2D5 763 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 ELOA2Q8IYF1 753 aaPredicted RBP10.32□□□□□ -0.76
SDCBP-212ENST00000523483 DAW1Q8N136 415 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 MCPH1Q8NEM0 835 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 KMT5AQ9NQR1 393 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 EMSYQ7Z589 1322 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 GNRH1P01148 92 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 SMTNP53814 917 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 TPM4P67936 248 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 MYL5Q02045 173 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 KCNB1Q14721 858 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 BICD1Q96G01 975 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 UNC93B1Q9H1C4 597 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 XPNPEP1Q9NQW7 623 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 FANCLQ9NW38 375 aa10.32□□□□□ -0.76
SDCBP-212ENST00000523483 DDX20Q9UHI6 824 aaKnown RBP10.32□□□□□ -0.76
SDCBP-212ENST00000523483 VTNP04004 478 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms