RNA–Protein interactions for RNA: ENST00000521941.1

CTNNA1-231, Transcript of catenin alpha 1, human

TSL 3

Gene CTNNA1, Length 224 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNNA1-231	ENST00000521941	RPLP2	P05387	115 aa	Known RBP	9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	HSP90AA1	P07900	732 aa	Known RBP	9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	YWHAB	P31946	246 aa	Known RBP	9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	TRAPPC10	P48553	1259 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	TOB1	P50616	345 aa	Predicted RBP	9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	POLG	P54098	1239 aa	Predicted RBP	9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	NLRP11	P59045	1033 aa	Known RBP	9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	PTGDR	Q13258	359 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	ORC2	Q13416	577 aa	Predicted RBP	9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	TARBP2	Q15633	366 aa	Known RBP	9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	XKR9	Q5GH70	373 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	GPR153	Q6NV75	609 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	NME8	Q8N427	588 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	ZNF579	Q8NAF0	562 aa	Known RBP	9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	SPRYD3	Q8NCJ5	442 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	NEK9	Q8TD19	979 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	TMEM40	Q8WWA1	233 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	NLRP7	Q8WX94	980 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	MYLIP	Q8WY64	445 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	APBB2	Q92870	758 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	ZNF576	Q9H609	170 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	ZSWIM4	Q9H7M6	989 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	CERS4	Q9HA82	394 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	SLC28A3	Q9HAS3	691 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	CYP26B1	Q9NR63	512 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	MTMR10	Q9NXD2	777 aa		9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	COL4A4	P53420	1690 aa	Predicted RBP	9.36	□□□□□ -0.91
CTNNA1-231	ENST00000521941	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	LCHN	A4D1U4	455 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	MED24	O75448	989 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	RPS6KA5	O75582	802 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	SLITRK3	O94933	977 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	ARHGEF15	O94989	841 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	FGFR4	P22455	802 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	GPC3	P51654	580 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	POTEG	Q6S5H5	508 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	OTUD6A	Q7L8S5	288 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	SPRED2	Q7Z698	418 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	RHPN2	Q8IUC4	686 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	C4orf19	Q8IY42	314 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	LINC01465	Q8N7H1	131 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	PHOSPHO2	Q8TCD6	241 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	PIGO	Q8TEQ8	1089 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	LINC01599	Q8WXQ3	324 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	SLC7A3	Q8WY07	619 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	TMEM143	Q96AN5	459 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	NLRP4	Q96MN2	994 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	GUCD1	Q96NT3	240 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	NIFK	Q9BYG3	293 aa	Known RBP	9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	SEMA6B	Q9H3T3	888 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	PRDM12	Q9H4Q4	367 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	MTUS1	Q9ULD2	1270 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	PADI3	Q9ULW8	664 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	NOC2L	Q9Y3T9	749 aa	Known RBP	9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	PCDHA11	Q9Y5I1	949 aa		9.35	□□□□□ -0.91
CTNNA1-231	ENST00000521941	KDM3A	Q9Y4C1	1321 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	TMEM265	A0A087WTH1	108 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	PP2D1	A8MPX8	630 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	USO1	O60763	962 aa	Known RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	GPR32	O75388	356 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	MAF	O75444	373 aa	Predicted RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	CSDE1	O75534	798 aa	Known RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	GJB5	O95377	273 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	PDC	P20941	246 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	CCT6A	P40227	531 aa	Known RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	DNM2	P50570	870 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	CRYBB1	P53674	252 aa	Predicted RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	GRIN2C	Q14957	1233 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	EMC2	Q15006	297 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	ZRSR1	Q15695	479 aa	Known RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	RILPL1	Q5EBL4	403 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	FOXD4L5	Q5VV16	416 aa	Predicted RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	HAUS3	Q68CZ6	603 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	MAEA	Q7L5Y9	396 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	FAM228A	Q86W67	206 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	KSR1	Q8IVT5	923 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	USP38	Q8NB14	1042 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	ERMN	Q8TAM6	284 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	SNX29	Q8TEQ0	813 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	CEP89	Q96ST8	783 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	YME1L1	Q96TA2	773 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	CDX2	Q99626	313 aa	Predicted RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	MTR	Q99707	1265 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	SUCLA2	Q9P2R7	463 aa	Predicted RBP	9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	LRWD1	Q9UFC0	647 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	ST3GAL5	Q9UNP4	418 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	MYH15	Q9Y2K3	1946 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	NLRC5	Q86WI3	1866 aa		9.34	□□□□□ -0.91
CTNNA1-231	ENST00000521941	CDH23	Q9H251	3354 aa		9.33	□□□□□ -0.92
CTNNA1-231	ENST00000521941		A0A087WZ62	844 aa		9.33	□□□□□ -0.92
CTNNA1-231	ENST00000521941	DENND3	A2RUS2	1198 aa		9.33	□□□□□ -0.92
CTNNA1-231	ENST00000521941	VWA3A	A6NCI4	1184 aa		9.33	□□□□□ -0.92
CTNNA1-231	ENST00000521941	MGEA5	O60502	916 aa		9.33	□□□□□ -0.92
CTNNA1-231	ENST00000521941	FOSL2	P15408	326 aa		9.33	□□□□□ -0.92
CTNNA1-231	ENST00000521941	SYT1	P21579	422 aa		9.33	□□□□□ -0.92
CTNNA1-231	ENST00000521941	RFC5	P40937	340 aa		9.33	□□□□□ -0.92
CTNNA1-231	ENST00000521941	FXR2	P51116	673 aa	Known RBP eCLIP	9.33	□□□□□ -0.92	2e-14	■■■□□ 15
CTNNA1-231	ENST00000521941	MKRN4P	Q13434	485 aa	Predicted RBP	9.33	□□□□□ -0.92

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