RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 EMILIN2Q9BXX0 1053 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 MRPL4Q9BYD3 311 aaKnown RBP6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 TMPRSS13Q9BYE2 586 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 CHMP4BQ9H444 224 aaKnown RBP6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 USP25Q9UHP3 1055 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 DENND2AQ9ULE3 1009 aa6.96□□□□□ -1.3
TMEM39A-212ENST00000497993 ATRNL1Q5VV63 1379 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 GREB1LQ9C091 1923 aaPredicted RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 A0A1B0GUL7 405 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 UPK3BL1B0FP48 263 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 UPK3BL2E5RIL1 263 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 GPR39O43194 453 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 SUSD5O60279 629 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 HSPA1AP0DMV8 641 aaKnown RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 HSPA1BP0DMV9 641 aaKnown RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 ARNTP27540 789 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 PHKA1P46020 1223 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 LRRC14Q15048 493 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 DHCR24Q15392 516 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 DLGAP5Q15398 846 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 APOBEC3HQ6NTF7 200 aaKnown RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 RUFY4Q6ZNE9 571 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 STRA8Q7Z7C7 330 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 RPAP2Q8IXW5 612 aaPredicted RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 SMAP1Q8IYB5 467 aaPredicted RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 AGGF1Q8N302 714 aaeCLIP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 TAB3Q8N5C8 712 aaPredicted RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 ENAHQ8N8S7 591 aaPredicted RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 PANK1Q8TE04 598 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 DDX1Q92499 740 aaKnown RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 KISS1RQ969F8 398 aaPredicted RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 PRMT6Q96LA8 375 aaPredicted RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 TEPSINQ96N21 525 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 DHRS4Q9BTZ2 278 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 SSBP4Q9BWG4 385 aaPredicted RBP6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 SUGCTQ9HAC7 445 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 FBRSQ9HAH7 460 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 CYP4F12Q9HCS2 524 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 SAGE1Q9NXZ1 904 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 OBP2AQ9NY56 170 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 ZNF69Q9UC07 566 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 CYP8B1Q9UNU6 501 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 PCDHB5Q9Y5E4 795 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 AOX1Q06278 1338 aa6.95□□□□□ -1.3
TMEM39A-212ENST00000497993 MYO1BO43795 1136 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 PAGE1O75459 146 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 MYL3P08590 195 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 GLB1P16278 677 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 L1CAMP32004 1257 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 HTR3AP46098 478 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 HUNKP57058 714 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 TFCP2Q12800 502 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 STAT4Q14765 748 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 UVSSAQ2YD98 709 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 L1TD1Q5T7N2 865 aaKnown RBP6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 SCARA3Q6AZY7 606 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 ZNF280DQ6N043 979 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 CCDC70Q6NSX1 233 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 RGMBQ6NW40 437 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 RASAL3Q86YV0 1011 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 ERC1Q8IUD2 1116 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 ITPRIPQ8IWB1 547 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 SULF2Q8IWU5 870 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 STK11IPQ8N1F8 1099 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 C2orf69Q8N8R5 385 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 SMG8Q8ND04 991 aaKnown RBP6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 JPH3Q8WXH2 748 aaPredicted RBP6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 TEKT1Q969V4 418 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 IDI2Q9BXS1 227 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 SIL1Q9H173 461 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 DEFB129Q9H1M3 183 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 LUC7LQ9NQ29 371 aaKnown RBP6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 KRT82Q9NSB4 513 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 ZNF70Q9UC06 446 aaPredicted RBP6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 ABT1Q9ULW3 272 aaKnown RBP6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 FPGT-TNNI3KV9GXZ4 949 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 SYNGAP1Q96PV0 1343 aa6.94□□□□□ -1.3
TMEM39A-212ENST00000497993 MEIS3P2A8K0S8 358 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 VSTM5A8MXK1 200 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 TCEA3O75764 348 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 ABLIM3O94929 683 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 DLGAP3O95886 979 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 GSTP1P09211 210 aaKnown RBP6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 UQCRFS1P1P0C7P4 283 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 ZBTB48P10074 688 aaPredicted RBP6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 ZSCAN20P17040 1043 aaPredicted RBP6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 PRDX5P30044 214 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 ADORA1P30542 326 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 NF2P35240 595 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 ALFQ53S48 1182 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 C20orf194Q5TEA3 1177 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 CYP4F22Q6NT55 531 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 FDX2Q6P4F2 183 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 CPXCR1Q8N123 301 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 PJA1Q8NG27 643 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 ZNF384Q8TF68 577 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 MEGF10Q96KG7 1140 aa6.93□□□□□ -1.3
TMEM39A-212ENST00000497993 SARGQ9BW04 601 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms