RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 DDB1Q16531 1140 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 ZFYVE27Q5T4F4 411 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 ERICH6BQ5W0A0 696 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 MCTP2Q6DN12 878 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 CC2D1AQ6P1N0 951 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-207ENST00000495817 HDGFL2Q7Z4V5 671 aaPredicted RBP7.83□□□□□ -1.16
CCDC39-207ENST00000495817 KLHL36Q8N4N3 616 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 KIAA1958Q8N8K9 716 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 CLRN3Q8NCR9 226 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 PCIF1Q9H4Z3 704 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 SLC39A2Q9NP94 309 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 INCENPQ9NQS7 918 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 BTBD7Q9P203 1132 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 ASB1Q9Y576 335 aa7.83□□□□□ -1.16
CCDC39-207ENST00000495817 E2F8A0AVK6 867 aa7.82□□□□□ -1.16
CCDC39-207ENST00000495817 DVL2O14641 736 aa7.82□□□□□ -1.16
CCDC39-207ENST00000495817 FOXP2O15409 715 aa7.82□□□□□ -1.16
CCDC39-207ENST00000495817 CYP17A1P05093 508 aa7.82□□□□□ -1.16
CCDC39-207ENST00000495817 ERVK-21P61565 698 aa7.82□□□□□ -1.16
CCDC39-207ENST00000495817 SMAD3P84022 425 aaKnown RBP7.82□□□□□ -1.16
CCDC39-207ENST00000495817 SEC23AQ15436 765 aa7.82□□□□□ -1.16
CCDC39-207ENST00000495817 TERF2Q15554 542 aa7.82□□□□□ -1.16
CCDC39-207ENST00000495817 BROXQ5VW32 411 aa7.82□□□□□ -1.16
CCDC39-207ENST00000495817 CXXC5Q7LFL8 322 aaKnown RBP7.82□□□□□ -1.16
CCDC39-207ENST00000495817 AHCYL2Q96HN2 611 aaKnown RBP7.82□□□□□ -1.16
CCDC39-207ENST00000495817 ELF4Q99607 663 aaPredicted RBP7.82□□□□□ -1.16
CCDC39-207ENST00000495817 BARX1Q9HBU1 254 aaPredicted RBP7.82□□□□□ -1.16
CCDC39-207ENST00000495817 ADAMTS20P59510 1910 aa7.82□□□□□ -1.16
CCDC39-207ENST00000495817 H0Y858 1186 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 SLC9A1P19634 815 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 LSP1P33241 339 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 GLRBP48167 497 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 FNTBP49356 437 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 LRRC32Q14392 662 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 INAVAQ3KP66 663 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 FSTL4Q6MZW2 842 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 PLEKHH3Q7Z736 793 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 RASSF3Q86WH2 238 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 REXO1L1PQ8IX06 675 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 RAVER1Q8IY67 606 aaKnown RBP7.81□□□□□ -1.16
CCDC39-207ENST00000495817 LGI4Q8N135 537 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 STPG3Q8N7X2 389 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 ZNF610Q8N9Z0 462 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 ASB15Q8WXK1 588 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 CAMKK2Q96RR4 588 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 SMAD5Q99717 465 aaKnown RBP7.81□□□□□ -1.16
CCDC39-207ENST00000495817 GALNT8Q9NY28 637 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 FBXO10Q9UK96 956 aa7.81□□□□□ -1.16
CCDC39-207ENST00000495817 KLHL18O94889 574 aa7.8□□□□□ -1.16
CCDC39-207ENST00000495817 IL18BPO95998 194 aa7.8□□□□□ -1.16
CCDC39-207ENST00000495817 MMEP08473 750 aa7.8□□□□□ -1.16
CCDC39-207ENST00000495817 KIF11P52732 1056 aa7.8□□□□□ -1.16
CCDC39-207ENST00000495817 KLF1Q13351 362 aaPredicted RBP7.8□□□□□ -1.16
CCDC39-207ENST00000495817 LILRA6Q6PI73 481 aa7.8□□□□□ -1.16
CCDC39-207ENST00000495817 ZBTB46Q86UZ6 589 aa7.8□□□□□ -1.16
CCDC39-207ENST00000495817 ZZZ3Q8IYH5 903 aa7.8□□□□□ -1.16
CCDC39-207ENST00000495817 ZDHHC14Q8IZN3 488 aa7.8□□□□□ -1.16
CCDC39-207ENST00000495817 CBARPQ8N350 705 aaPredicted RBP7.8□□□□□ -1.16
CCDC39-207ENST00000495817 CXorf38Q8TB03 319 aa7.8□□□□□ -1.16
CCDC39-207ENST00000495817 TACO1Q9BSH4 297 aaKnown RBP7.8□□□□□ -1.16
CCDC39-207ENST00000495817 TOMM22Q9NS69 142 aa7.8□□□□□ -1.16
CCDC39-207ENST00000495817 TNKSO95271 1327 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 CUTAO60888 179 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 PPP2R5AQ15172 486 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 STILQ15468 1287 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 SURF1Q15526 300 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 CATSPEREQ5SY80 951 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 HIPK4Q8NE63 616 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 E2F7Q96AV8 911 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 MBD6Q96DN6 1003 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 C20orf173Q96LM9 149 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 GBP4Q96PP9 640 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 BTBD2Q9BX70 525 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 SLC13A1Q9BZW2 595 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 VTA1Q9NP79 307 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 GEMIN8Q9NWZ8 242 aaKnown RBP7.79□□□□□ -1.16
CCDC39-207ENST00000495817 ADAM29Q9UKF5 820 aa7.79□□□□□ -1.16
CCDC39-207ENST00000495817 WASHC2AQ641Q2 1341 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 SHTN1A0MZ66 631 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 AKAP10O43572 662 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 TSPAN6O43657 245 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 MAFO75444 373 aaPredicted RBP7.78□□□□□ -1.16
CCDC39-207ENST00000495817 MPIG6BO95866 241 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 CD40P25942 277 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 RAB27AP51159 221 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 KRT85P78386 507 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 NFATC3Q12968 1075 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 PIN1Q13526 163 aaPredicted RBP7.78□□□□□ -1.16
CCDC39-207ENST00000495817 TMEM132BQ14DG7 1078 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 UBXN11Q5T124 520 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 PHF19Q5T6S3 580 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 Q6ZUG5 572 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 NUDT10Q8NFP7 164 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 CALML6Q8TD86 181 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 NUDT11Q96G61 164 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 AJUBAQ96IF1 538 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 ADAM7Q9H2U9 754 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 ZMAT4Q9H898 229 aa7.78□□□□□ -1.16
CCDC39-207ENST00000495817 NOC2LQ9Y3T9 749 aaKnown RBP7.78□□□□□ -1.16
CCDC39-207ENST00000495817 RASSF10A6NK89 507 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms