RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 UCHL3P15374 230 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 MCF2L2Q86YR7 1114 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 IFT20Q8IY31 132 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 SAMD3Q8N6K7 520 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 GDAP1L1Q96MZ0 367 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 PSMB7Q99436 277 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 UNC45AQ9H3U1 944 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 NENFQ9UMX5 172 aa28.53■■■□□ 2.16
HLA-C-208ENST00000487245 OPA1O60313 960 aa28.52■■■□□ 2.16
HLA-C-208ENST00000487245 ARP10275 920 aa28.52■■■□□ 2.16
HLA-C-208ENST00000487245 PON1P27169 355 aa28.52■■■□□ 2.16
HLA-C-208ENST00000487245 MATR3P43243 847 aaKnown RBP eCLIP28.52■■■□□ 2.16
HLA-C-208ENST00000487245 LRRC31Q6UY01 552 aa28.52■■■□□ 2.16
HLA-C-208ENST00000487245 SLC16A10Q8TF71 515 aa28.52■■■□□ 2.16
HLA-C-208ENST00000487245 SPAG5Q96R06 1193 aa28.52■■■□□ 2.16
HLA-C-208ENST00000487245 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.52■■■□□ 2.16
HLA-C-208ENST00000487245 FBXO28Q9NVF7 368 aa28.52■■■□□ 2.16
HLA-C-208ENST00000487245 ADAMTS1Q9UHI8 967 aa28.52■■■□□ 2.16
HLA-C-208ENST00000487245 CCPG1Q9ULG6 757 aa28.52■■■□□ 2.16
HLA-C-208ENST00000487245 LOXHD1Q8IVV2 1947 aa28.51■■■□□ 2.16
HLA-C-208ENST00000487245 IPO5O00410 1097 aaKnown RBP28.51■■■□□ 2.15
HLA-C-208ENST00000487245 TGFB1I1O43294 461 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 PSMC2P35998 433 aaKnown RBP28.51■■■□□ 2.15
HLA-C-208ENST00000487245 UBXN2AP68543 259 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 TNIP1Q15025 636 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 IFI16Q16666 785 aaKnown RBP28.51■■■□□ 2.15
HLA-C-208ENST00000487245 PRPF38AQ8NAV1 312 aaKnown RBP28.51■■■□□ 2.15
HLA-C-208ENST00000487245 FAM76AQ8TAV0 307 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 LPAR1Q92633 364 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 WDR46O15213 610 aaKnown RBP28.51■■■□□ 2.15
HLA-C-208ENST00000487245 SLC9A1P19634 815 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 GUCY2CP25092 1073 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 SLC7A5Q01650 507 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 GHRHRQ02643 423 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 RIN2Q8WYP3 895 aaPredicted RBP28.51■■■□□ 2.15
HLA-C-208ENST00000487245 MS4A14Q96JA4 679 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 MAP3K20Q9NYL2 800 aaKnown RBP28.51■■■□□ 2.15
HLA-C-208ENST00000487245 PCDHB13Q9Y5F0 798 aa28.51■■■□□ 2.15
HLA-C-208ENST00000487245 RPTORQ8N122 1335 aa28.5■■■□□ 2.15
HLA-C-208ENST00000487245 PTK2Q05397 1052 aa28.5■■■□□ 2.15
HLA-C-208ENST00000487245 CXCL9Q07325 125 aa28.5■■■□□ 2.15
HLA-C-208ENST00000487245 DCAF17Q5H9S7 520 aaPredicted RBP28.5■■■□□ 2.15
HLA-C-208ENST00000487245 ZNF720Q7Z2F6 126 aa28.5■■■□□ 2.15
HLA-C-208ENST00000487245 ZNF571Q7Z3V5 609 aaPredicted RBP28.5■■■□□ 2.15
HLA-C-208ENST00000487245 CDAN1Q8IWY9 1227 aa28.5■■■□□ 2.15
HLA-C-208ENST00000487245 SLC35C1Q96A29 364 aa28.5■■■□□ 2.15
HLA-C-208ENST00000487245 RBBP6Q7Z6E9 1792 aaKnown RBP28.5■■■□□ 2.15
HLA-C-208ENST00000487245 WNT10BO00744 389 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 NMT1P30419 496 aaKnown RBP28.49■■■□□ 2.15
HLA-C-208ENST00000487245 JAM2P57087 298 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 TCERG1LQ5VWI1 586 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 HS2ST1Q7LGA3 356 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 BORCS6Q96GS4 357 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 PACSIN1Q9BY11 444 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 ZNF341Q9BYN7 854 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 SIX2Q9NPC8 291 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 PNMA2Q9UL42 364 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 SFI1A8K8P3 1242 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 CLIC2O15247 247 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 FTCDO95954 541 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 ACTN1P12814 892 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 PPFIA1Q13136 1202 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 CIAPIN1Q6FI81 312 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 FAM178BQ8IXR5 827 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 FAM186BQ8IYM0 893 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 MREGQ8N565 214 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 ZBTB9Q96C00 473 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 GLIS2Q9BZE0 524 aaPredicted RBP28.49■■■□□ 2.15
HLA-C-208ENST00000487245 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.49■■■□□ 2.15
HLA-C-208ENST00000487245 TMEM59LQ9UK28 342 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 INTUQ9ULD6 942 aa28.49■■■□□ 2.15
HLA-C-208ENST00000487245 ARHGEF35A5YM69 484 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 GOLGA6CA6NDK9 693 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 GOLGA6DP0CG33 693 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 INPP5BP32019 993 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 CASP4P49662 377 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 ARID5AQ03989 594 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 PAK2Q13177 524 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 SAMD1Q6SPF0 538 aaPredicted RBP28.48■■■□□ 2.15
HLA-C-208ENST00000487245 EIF1ADQ8N9N8 165 aaKnown RBP28.48■■■□□ 2.15
HLA-C-208ENST00000487245 PBKQ96KB5 322 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 MYOZ2Q9NPC6 264 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 GOLGA6AQ9NYA3 693 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 ZMYM2Q9UBW7 1377 aa28.48■■■□□ 2.15
HLA-C-208ENST00000487245 PHF20L1A8MW92 1017 aa28.47■■■□□ 2.15
HLA-C-208ENST00000487245 GFPT2O94808 682 aa28.47■■■□□ 2.15
HLA-C-208ENST00000487245 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP28.47■■■□□ 2.15
HLA-C-208ENST00000487245 AGBL1Q96MI9 1066 aa28.47■■■□□ 2.15
HLA-C-208ENST00000487245 LXNQ9BS40 222 aa28.47■■■□□ 2.15
HLA-C-208ENST00000487245 NAGPAQ9UK23 515 aa28.47■■■□□ 2.15
HLA-C-208ENST00000487245 DAAM1Q9Y4D1 1078 aa28.47■■■□□ 2.15
HLA-C-208ENST00000487245 ZNF536O15090 1300 aa28.47■■■□□ 2.15
HLA-C-208ENST00000487245 A0A0A6YYK5 440 aaPredicted RBP28.46■■■□□ 2.15
HLA-C-208ENST00000487245 KCNA1Q09470 495 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 TNFAIP1Q13829 316 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 MYBPC2Q14324 1141 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 NBPF9Q3BBW0 867 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 USP38Q8NB14 1042 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 FIZ1Q96SL8 496 aa28.46■■■□□ 2.15
HLA-C-208ENST00000487245 KIAA1683Q9H0B3 1180 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms