RNA–Protein interactions for RNA: ENST00000475997.6

HNRNPU-208, Transcript of heterogeneous nuclear ribonucleoprotein U, human

TSL 5

Gene HNRNPU, Length 5,290 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPU-208	ENST00000475997	DACH2	Q96NX9	599 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	TRIM56	Q9BRZ2	755 aa	Known RBP	6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	OSBPL1A	Q9BXW6	950 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	FUT8	Q9BYC5	575 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	NDST4	Q9H3R1	872 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	UTP6	Q9NYH9	597 aa	Known RBP	6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	IPO5	O00410	1097 aa	Known RBP	6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	GYG2	O15488	501 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	N4BP1	O75113	896 aa	Known RBP	6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ATP1A1	P05023	1023 aa	Known RBP	6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	MYL1	P05976	194 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	MSH2	P43246	934 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	AP2B1	P63010	937 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	CACNB1	Q02641	598 aa	Predicted RBP	6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	CCDC15	Q0P6D6	951 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	AP1B1	Q10567	949 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ARHGAP44	Q17R89	818 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	TBC1D9B	Q66K14	1250 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	PARP9	Q8IXQ6	854 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	RIOK1	Q9BRS2	568 aa	Known RBP	6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	LSM14B	Q9BX40	385 aa	Known RBP	6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ZNF277	Q9NRM2	450 aa	Predicted RBP	6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ZNF229	Q9UJW7	825 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	TRPC6	Q9Y210	931 aa		6.56	□□□□□ -1.36
HNRNPU-208	ENST00000475997	CNTNAP5	Q8WYK1	1306 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997		A0A0U1RQJ8	604 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	CDK8	P49336	464 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	CARS	P49589	748 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ARHGDIA	P52565	204 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	PSMC1	P62191	440 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ERVK-24	P63145	666 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ITPK1	Q13572	414 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	NT5DC1	Q5TFE4	455 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	DPP8	Q6V1X1	898 aa	Predicted RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	GSPT2	Q8IYD1	628 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	TEX9	Q8N6V9	391 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	IPO11	Q9UI26	975 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	DCAF8L1	A6NGE4	600 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997		H0Y626	953 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	TRIM16	O95361	564 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	S100B	P04271	92 aa	Predicted RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	PYGL	P06737	847 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	DHX9	Q08211	1270 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	STK4	Q13043	487 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	CUL1	Q13616	776 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	MAN2A1	Q16706	1144 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ANKRD40	Q6AI12	368 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	FBXL13	Q8NEE6	735 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	U2AF1L4	Q8WU68	220 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	HOOK2	Q96ED9	719 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	MRPS26	Q9BYN8	205 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	MAGEF1	Q9HAY2	307 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ATP11B	Q9Y2G3	1177 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	STXBP3	O00186	592 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	PGRMC1	O00264	195 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	GSTA4	O15217	222 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	VEGFA	P15692	232 aa	Predicted RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	KLRK1	P26718	216 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	SLC16A2	P36021	539 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	SLC1A4	P43007	532 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	DEFA1	P59665	94 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	DEFA3	P59666	94 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	EHHADH	Q08426	723 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	TCP10	Q12799	353 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	BFSP1	Q12934	665 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	NR1H3	Q13133	447 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	TAF12	Q16514	161 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ACBD5	Q5T8D3	534 aa	Predicted RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	CDKAL1	Q5VV42	579 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	TRMT10C	Q7L0Y3	403 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	GPBP1	Q86WP2	473 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	TUBGCP3	Q96CW5	907 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	CSRNP1	Q96S65	589 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	PNKP	Q96T60	521 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	MMS19	Q96T76	1030 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	HSD3B7	Q9H2F3	369 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	PSTPIP2	Q9H939	334 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	SH3GLB2	Q9NR46	395 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	PANK4	Q9NVE7	773 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	NDE1	Q9NXR1	346 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	KIAA1024	Q9UPX6	916 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	POTEM	A6NI47	508 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ADCY3	O60266	1144 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	EXOC3	O60645	756 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	STAT2	P52630	851 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	GABPA	Q06546	454 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	KLC1	Q07866	573 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	GLE1	Q53GS7	698 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	C12orf60	Q5U649	245 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	PPP1R2P3	Q6NXS1	205 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	INTS5	Q6P9B9	1019 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	EPB41L5	Q9HCM4	733 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	BARHL2	Q9NY43	387 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	STX18	Q9P2W9	335 aa	Known RBP	6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	PCDHA13	Q9Y5I0	950 aa		6.55	□□□□□ -1.36
HNRNPU-208	ENST00000475997	IQCA1L	A6NCM1	817 aa		6.54	□□□□□ -1.36
HNRNPU-208	ENST00000475997	ZNF185	O15231	689 aa		6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms