RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 TMEM260Q9NX78 707 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 MAP10Q9P2G4 905 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 PRPF3O43395 683 aaKnown RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 CHEK2O96017 543 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 GMPSP49915 693 aaPredicted RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 ALCAMQ13740 583 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 KIF24Q5T7B8 1368 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 ZMYM4Q5VZL5 1548 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 KATNAL1Q9BW62 490 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 DONSONQ9NYP3 566 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 HEY1Q9Y5J3 304 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 UTYO14607 1347 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 DFFAO00273 331 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 SRGAP2O75044 1071 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 DPEP1P16444 411 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 KRT76Q01546 638 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 SMAD1Q15797 465 aaKnown RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 TSNAXIP1Q2TAA8 658 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 MAP3K21Q5TCX8 1036 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.56□□□□□ -1.22e-8■□□□□ 9.9
CD46-212ENST00000469535 BRIP1Q9BX63 1249 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 TJP2Q9UDY2 1190 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 RSPH10B2B2RC85 870 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 CYP27B1O15528 508 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 RSPH10BP0C881 870 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 PTPN12Q05209 780 aaKnown RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 MAN2A1Q16706 1144 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 ZNF658Q5TYW1 1059 aaPredicted RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 FBXL13Q8NEE6 735 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 CFAP61Q8NHU2 1237 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 TEKT4Q8WW24 435 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 DHTKD1Q96HY7 919 aaPredicted RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 MRPL4Q9BYD3 311 aaKnown RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 HOMER3Q9NSC5 361 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 ORC6Q9Y5N6 252 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 CPDO75976 1380 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 UBE4BO95155 1302 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 EFCAB8A8MWE9 144 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 PIK3R2O00459 728 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 PER1O15534 1290 aaPredicted RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 OCM2P0CE71 109 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 OCMP0CE72 109 aaPredicted RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 CASP14P31944 242 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 ATP1A2P50993 1020 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 SESN3P58005 492 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 IMPG1Q17R60 797 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 PPP1R2P3Q6NXS1 205 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 TMEM270Q6UE05 265 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 LZICQ8WZA0 190 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 ACAP3Q96P50 834 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 TMEM47Q9BQJ4 181 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 MXD3Q9BW11 206 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 LSM7Q9UK45 103 aaKnown RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 SUFUQ9UMX1 484 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 GTF2A1P52655 376 aaPredicted RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 ATN1P54259 1190 aaPredicted RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 LBRQ14739 615 aaKnown RBP7.56□□□□□ -1.2
CD46-212ENST00000469535 BBS9Q3SYG4 887 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 C10orf67Q8IYJ2 551 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 RUNDC3BQ96NL0 473 aa7.56□□□□□ -1.2
CD46-212ENST00000469535 ARHGEF5Q12774 1597 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 POTEMA6NI47 508 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 F5H6K3 240 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 ECEL1O95672 775 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 MX2P20592 715 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 FKBP3Q00688 224 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 GUCY2DQ02846 1103 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 KLRC3Q07444 240 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 KIF19Q2TAC6 998 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 RNF10Q8N5U6 811 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 KRT82Q9NSB4 513 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 GINM1Q9NU53 330 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 RNF123Q5XPI4 1314 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 PSMD14O00487 310 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 OR1G1P47890 313 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 PAPOLAP51003 745 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 PHEXP78562 749 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 TOGARAM2Q6ZUX3 1019 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 BZW1Q7L1Q6 419 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 EGFL8Q99944 293 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 NUDT12Q9BQG2 462 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 TACO1Q9BSH4 297 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 TBK1Q9UHD2 729 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 PRR23AA6NEV1 266 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 ENC1O14682 589 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 TRAPPC3O43617 180 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 CETPP11597 493 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 CA4P22748 312 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 RASSF2P50749 326 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 SLFNL1Q499Z3 407 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 KDELC2Q7Z4H8 507 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 FBXO18Q8NFZ0 1043 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 SLC9A2Q9UBY0 812 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 UBA6A0AVT1 1052 aaPredicted RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 SYF2O95926 243 aaKnown RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 FTCDO95954 541 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 CYP19A1P11511 503 aaPredicted RBP7.55□□□□□ -1.2
CD46-212ENST00000469535 AP1B1Q10567 949 aa7.55□□□□□ -1.2
CD46-212ENST00000469535 DEFB132Q7Z7B7 95 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms