RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 DAW1Q8N136 415 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 TMEM174Q8WUU8 243 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 OTUD5Q96G74 571 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 MAP7D2Q96T17 732 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 LSM14BQ9BX40 385 aaKnown RBP17.21■□□□□ 0.35
SNX13-204ENST00000444712 PLCB1Q9NQ66 1216 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 AGTPBP1Q9UPW5 1226 aa17.21■□□□□ 0.35
SNX13-204ENST00000444712 KRT86O43790 486 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 AKAP3O75969 853 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 SPA17Q15506 151 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 ZC2HC1CQ53FD0 456 aaPredicted RBP17.2■□□□□ 0.34
SNX13-204ENST00000444712 XKR9Q5GH70 373 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 RRAGAQ7L523 313 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 FASTKD5Q7L8L6 764 aaKnown RBP17.2■□□□□ 0.34
SNX13-204ENST00000444712 KIAA1328Q86T90 577 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 FAM186BQ8IYM0 893 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 SYCP3Q8IZU3 236 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 BAP1Q92560 729 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 HVCN1Q96D96 273 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 ACCSQ96QU6 501 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 TSGA10Q9BZW7 698 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 SPATC1LQ9H0A9 340 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 SSU72P8A0A1W2PR75 194 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 LRRC53A6NM62 1247 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 PPP2R5AQ15172 486 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 UGCGQ16739 394 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 MIS18BP1Q6P0N0 1132 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.2■□□□□ 0.34
SNX13-204ENST00000444712 WDR24Q96S15 920 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 DEF6Q9H4E7 631 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 C17orf75Q9HAS0 396 aa17.2■□□□□ 0.34
SNX13-204ENST00000444712 LRRC37A2A6NM11 1700 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 EPHB6O15197 1021 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 CLIC2O15247 247 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 ERCC3P19447 782 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 ABCD1P33897 745 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 ALDH5A1P51649 535 aaPredicted RBP17.19■□□□□ 0.34
SNX13-204ENST00000444712 SFMBT2Q5VUG0 894 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 POLD4Q9HCU8 107 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 AGPAT3Q9NRZ7 376 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 DMAC2Q9NW81 257 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.19■□□□□ 0.34
SNX13-204ENST00000444712 ZNF215Q9UL58 517 aaPredicted RBP17.19■□□□□ 0.34
SNX13-204ENST00000444712 MYO6Q9UM54 1294 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 DAAM1Q9Y4D1 1078 aa17.19■□□□□ 0.34
SNX13-204ENST00000444712 GLTPD2A6NH11 291 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 UNCXA6NJT0 531 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 BACH1O14867 736 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 RGS20O76081 388 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 OSBPP22059 807 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 ARHGAP25P42331 645 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 SMTNP53814 917 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 KCNA1Q09470 495 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 MAPK8IP2Q13387 824 aaPredicted RBP17.18■□□□□ 0.34
SNX13-204ENST00000444712 EXOC3L4Q17RC7 722 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 SLC9C1Q4G0N8 1177 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 DCAF17Q5H9S7 520 aaPredicted RBP17.18■□□□□ 0.34
SNX13-204ENST00000444712 ZNF569Q5MCW4 686 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 TCERG1LQ5VWI1 586 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 GBP6Q6ZN66 633 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 C12orf56Q8IXR9 622 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 CNKSR2Q8WXI2 1034 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 KIFAP3Q92845 792 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 BTBD7Q9P203 1132 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 GABBR1Q9UBS5 961 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 KCNG1Q9UIX4 513 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 FBXL5Q9UKA1 691 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 EXOC7Q9UPT5 735 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 CTAGE9A4FU28 777 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 POTEB2H3BUK9 544 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 LCA5LO95447 670 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 HERVK_113P62684 666 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 PNMA8AQ86V59 439 aaPredicted RBP17.18■□□□□ 0.34
SNX13-204ENST00000444712 MNS1Q8NEH6 495 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 MCPH1Q8NEM0 835 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 SLC35C1Q96A29 364 aa17.18■□□□□ 0.34
SNX13-204ENST00000444712 ASCC2Q9H1I8 757 aaPredicted RBP17.18■□□□□ 0.34
SNX13-204ENST00000444712 LUC7LQ9NQ29 371 aaKnown RBP17.18■□□□□ 0.34
SNX13-204ENST00000444712 REXO2Q9Y3B8 237 aaKnown RBP17.18■□□□□ 0.34
SNX13-204ENST00000444712 NOL4O94818 638 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 VAV2P52735 878 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 NCKAP1LP55160 1127 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 POLR2FP61218 127 aaKnown RBP17.17■□□□□ 0.34
SNX13-204ENST00000444712 GTF2BQ00403 316 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 CCDC122Q5T0U0 273 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 DLK2Q6UY11 383 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 NCAPG2Q86XI2 1143 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 CCDC155Q8N6L0 562 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 JAKMIP2Q96AA8 810 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 BORCS6Q96GS4 357 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 BCAS3Q9H6U6 928 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 MRFAP1Q9Y605 127 aa17.17■□□□□ 0.34
SNX13-204ENST00000444712 DGAT1O75907 488 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 SERPING1P05155 500 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 CASP4P49662 377 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 KIF11P52732 1056 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 ACTR2P61160 394 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 UTP14CQ5TAP6 766 aaKnown RBP17.16■□□□□ 0.34
SNX13-204ENST00000444712 ABHD15Q6UXT9 468 aa17.16■□□□□ 0.34
SNX13-204ENST00000444712 MAEAQ7L5Y9 396 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms