RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 SSR1P43307 286 aaKnown RBP8.91□□□□□ -0.98
CCDC39-201ENST00000442201 GYS2P54840 703 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 MYCT1Q8N699 235 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 CSGALNACT2Q8N6G5 542 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 SPC24Q8NBT2 197 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 GLIS3Q8NEA6 775 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 NOC3LQ8WTT2 800 aaKnown RBP8.91□□□□□ -0.98
CCDC39-201ENST00000442201 SEPT1Q8WYJ6 367 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 ZNF302Q9NR11 478 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 OLFML3Q9NRN5 406 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.91□□□□□ -0.98
CCDC39-201ENST00000442201 TELO2Q9Y4R8 837 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 USO1O60763 962 aaKnown RBP8.91□□□□□ -0.98
CCDC39-201ENST00000442201 PRKCEQ02156 737 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 LRRC63Q05C16 580 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 NOGQ13253 232 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 XKR3Q5GH77 459 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 CELF3Q5SZQ8 465 aaKnown RBP8.91□□□□□ -0.98
CCDC39-201ENST00000442201 ANKRD40Q6AI12 368 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 CYP4F22Q6NT55 531 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 CCDC62Q6P9F0 684 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 MAMDC4Q6UXC1 1216 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 ANO5Q75V66 913 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 ZNF397Q8NF99 534 aaPredicted RBP8.91□□□□□ -0.98
CCDC39-201ENST00000442201 KIAA1524Q8TCG1 905 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 MAML3Q96JK9 1138 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 CTAGE1Q96RT6 745 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 TSG101Q99816 390 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 TIPINQ9BVW5 301 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 SEMA6BQ9H3T3 888 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 MRPL44Q9H9J2 332 aaKnown RBP8.91□□□□□ -0.98
CCDC39-201ENST00000442201 POLD4Q9HCU8 107 aa8.91□□□□□ -0.98
CCDC39-201ENST00000442201 IGSF9BQ9UPX0 1349 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 TMEM150BA6NC51 233 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 SFI1A8K8P3 1242 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 NOP56O00567 594 aaKnown RBP8.9□□□□□ -0.98
CCDC39-201ENST00000442201 ZNF131P52739 623 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 NPEPPSP55786 919 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 CRHR2Q13324 411 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 DNAJC21Q5F1R6 531 aaKnown RBP8.9□□□□□ -0.98
CCDC39-201ENST00000442201 PLA2G4FQ68DD2 849 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 FOXR2Q6PJQ5 311 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 SYT10Q6XYQ8 523 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 TXLNBQ8N3L3 684 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 CEP170P1Q96L14 293 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 DUSP9Q99956 384 aaKnown RBP8.9□□□□□ -0.98
CCDC39-201ENST00000442201 SRRTQ9BXP5 876 aaKnown RBP8.9□□□□□ -0.98
CCDC39-201ENST00000442201 THAP9Q9H5L6 903 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 LARSQ9P2J5 1176 aaKnown RBP8.9□□□□□ -0.98
CCDC39-201ENST00000442201 IGKV6D-21A0A0A0MT36 114 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 GSTTP1A0A1W2PQM5 241 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 CA12O43570 354 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 HIP1RO75146 1068 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 ECM2O94769 699 aaPredicted RBP8.9□□□□□ -0.98
CCDC39-201ENST00000442201 ALDH1A1P00352 501 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 ODR4Q5SWX8 454 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 FAM160B1Q5W0V3 765 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 SCFD1Q8WVM8 642 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 ZIC5Q96T25 663 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 SH2D3AQ9BRG2 576 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 TINF2Q9BSI4 451 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 FGFBP2Q9BYJ0 223 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 TMX1Q9H3N1 280 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 PDGFCQ9NRA1 345 aa8.9□□□□□ -0.98
CCDC39-201ENST00000442201 MAGEC2Q9UBF1 373 aaPredicted RBP8.9□□□□□ -0.98
CCDC39-201ENST00000442201 SEPT9Q9UHD8 586 aaPredicted RBP8.9□□□□□ -0.98
CCDC39-201ENST00000442201 MAFBQ9Y5Q3 323 aaPredicted RBP8.9□□□□□ -0.98
CCDC39-201ENST00000442201 GCNT3O95395 438 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 FGFR1OPO95684 399 aaKnown RBP8.9□□□□□ -0.99
CCDC39-201ENST00000442201 TCF7P36402 384 aaPredicted RBP8.9□□□□□ -0.99
CCDC39-201ENST00000442201 MAP2K5Q13163 448 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 MAPK7Q13164 816 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 FILIP1LQ4L180 1135 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 STXBP4Q6ZWJ1 553 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 MAEAQ7L5Y9 396 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 FAM114A1Q8IWE2 563 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 NELFCDQ8IXH7 590 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 FAM178BQ8IXR5 827 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 MSL3Q8N5Y2 521 aaKnown RBP8.9□□□□□ -0.99
CCDC39-201ENST00000442201 DRC1Q96MC2 740 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 SPATA33Q96N06 139 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 AZI2Q9H6S1 392 aa8.9□□□□□ -0.99
CCDC39-201ENST00000442201 ANKRD33BA6NCL7 494 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 KCNJ18B7U540 433 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 STBD1O95210 358 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 EEF1GP26641 437 aaKnown RBP8.89□□□□□ -0.99
CCDC39-201ENST00000442201 STAT5BP51692 787 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 KCNJ12Q14500 433 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 DEFB115Q30KQ5 88 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 HSDL1Q3SXM5 330 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 TCP11X2Q5H9J9 407 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 MORN1Q5T089 497 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 TAPT1Q6NXT6 567 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 SRLQ86TD4 932 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 DAW1Q8N136 415 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 NPLOC4Q8TAT6 608 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 ABHD16BQ9H3Z7 469 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 TNPO2O14787 897 aaKnown RBP8.89□□□□□ -0.99
CCDC39-201ENST00000442201 DGAT1O75907 488 aa8.89□□□□□ -0.99
CCDC39-201ENST00000442201 SNAI1O95863 264 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms