RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 TMEM106CQ9BVX2 250 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 C17orf75Q9HAS0 396 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 ATP6V0A4Q9HBG4 840 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 RMND1Q9NWS8 449 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 SEL1LQ9UBV2 794 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 KCNG1Q9UIX4 513 aa14.09□□□□□ -0.15
SCLT1-202ENST00000439369 FRMD3A2A2Y4 597 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 MBLAC1A4D2B0 266 aaPredicted RBP14.08□□□□□ -0.16
SCLT1-202ENST00000439369 KRT18P05783 430 aaKnown RBP14.08□□□□□ -0.16
SCLT1-202ENST00000439369 GAP43P17677 238 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 SCP2P22307 547 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 ADAM17P78536 824 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 KCNB1Q14721 858 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 EMC2Q15006 297 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 CAVIN1Q6NZI2 390 aaKnown RBP14.08□□□□□ -0.16
SCLT1-202ENST00000439369 CCDC65Q8IXS2 484 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 ZNF710Q8N1W2 664 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 TRIML1Q8N9V2 468 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 SLC43A3Q8NBI5 491 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 TCP11Q8WWU5 503 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 KIFAP3Q92845 792 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 SMARCE1Q969G3 411 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 DNAJC19Q96DA6 116 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 ANP32EQ9BTT0 268 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 RUSC1Q9BVN2 902 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 TMEM63CQ9P1W3 806 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 KIAA1468Q9P260 1216 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 COL4A3BPQ9Y5P4 624 aa14.08□□□□□ -0.16
SCLT1-202ENST00000439369 A0A087WWV3 80 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 A0A0U1RQG5 324 aaPredicted RBP14.07□□□□□ -0.16
SCLT1-202ENST00000439369 A0A1W2PQ45 241 aaPredicted RBP14.07□□□□□ -0.16
SCLT1-202ENST00000439369 A0A1W2PQY0 241 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 TMEM150BA6NC51 233 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 USO1O60763 962 aaKnown RBP14.07□□□□□ -0.16
SCLT1-202ENST00000439369 TBCAO75347 108 aaKnown RBP14.07□□□□□ -0.16
SCLT1-202ENST00000439369 C22orf31O95567 290 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 TFRCP02786 760 aaKnown RBP14.07□□□□□ -0.16
SCLT1-202ENST00000439369 MYCNP04198 464 aaPredicted RBP14.07□□□□□ -0.16
SCLT1-202ENST00000439369 DNM2P50570 870 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 ZNF131P52739 623 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 ASIC1P78348 528 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 MAPK8IP2Q13387 824 aaPredicted RBP14.07□□□□□ -0.16
SCLT1-202ENST00000439369 CUL4BQ13620 913 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 GIT2Q14161 759 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 DHX8Q14562 1220 aaKnown RBP14.07□□□□□ -0.16
SCLT1-202ENST00000439369 NBPF20Q3BBV1 942 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 UNC13DQ70J99 1090 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 LMBR1Q8WVP7 490 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 REEP2Q9BRK0 252 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 GTF2IRD1Q9UHL9 959 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 TUBE1Q9UJT0 475 aa14.07□□□□□ -0.16
SCLT1-202ENST00000439369 PCNTO95613 3336 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 SMIM35A0A1B0GVV1 85 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 C17orf102A2RUQ5 167 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 RPN1P04843 607 aaKnown RBP14.06□□□□□ -0.16
SCLT1-202ENST00000439369 PRR29P0C7W0 189 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 KLRC1P26715 233 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 TMOD1P28289 359 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 ABCD1P33897 745 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 SARSP49591 514 aaKnown RBP14.06□□□□□ -0.16
SCLT1-202ENST00000439369 CDC42EP1Q00587 391 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 PSMD2Q13200 908 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 PNOCQ13519 176 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 ITGA7Q13683 1181 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 CAMK4Q16566 473 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 MARCH8Q5T0T0 291 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 IER5Q5VY09 327 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 MTHFD1LQ6UB35 978 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 GRAMD1CQ8IYS0 662 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 LINC01465Q8N7H1 131 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 SLC17A8Q8NDX2 589 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 STAMQ92783 540 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 XPNPEP1Q9NQW7 623 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 STARD7Q9NQZ5 370 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 LARSQ9P2J5 1176 aaKnown RBP14.06□□□□□ -0.16
SCLT1-202ENST00000439369 HDAC6Q9UBN7 1215 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 PCDHA5Q9Y5H7 936 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 PCDHA2Q9Y5H9 948 aa14.06□□□□□ -0.16
SCLT1-202ENST00000439369 ASAP2O43150 1006 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 HIP1RO75146 1068 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 RHOBTB3O94955 611 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 FAM13AO94988 1023 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 MYCP01106 439 aaPredicted RBP14.05□□□□□ -0.16
SCLT1-202ENST00000439369 MAPTP10636 758 aaKnown RBP14.05□□□□□ -0.16
SCLT1-202ENST00000439369 COL6A1P12109 1028 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 EHHADHQ08426 723 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 MAPK7Q13164 816 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 MXD4Q14582 209 aaPredicted RBP14.05□□□□□ -0.16
SCLT1-202ENST00000439369 PPP2R5AQ15172 486 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 C1orf53Q5VUE5 145 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 TAF2Q6P1X5 1199 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 DYMQ7RTS9 669 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 TRMT1LQ7Z2T5 733 aaKnown RBP14.05□□□□□ -0.16
SCLT1-202ENST00000439369 PSPC1Q8WXF1 523 aaKnown RBP14.05□□□□□ -0.16
SCLT1-202ENST00000439369 KCNN1Q92952 543 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 BLZF1Q9H2G9 400 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 PARVGQ9HBI0 331 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 OLFML3Q9NRN5 406 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 EXOC1Q9NV70 894 aa14.05□□□□□ -0.16
SCLT1-202ENST00000439369 SETD4Q9NVD3 440 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms