RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 ONECUT3O60422 494 aaPredicted RBP18.18■□□□□ 0.5
LIMS2-208ENST00000410011 GCNT3O95395 438 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 CASP4P49662 377 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 TRAF1Q13077 416 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 PODNQ7Z5L7 613 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 RUSC1Q9BVN2 902 aa18.18■□□□□ 0.5
LIMS2-208ENST00000410011 GCOM1H8Y6P7 765 aaPredicted RBP18.17■□□□□ 0.5
LIMS2-208ENST00000410011 KRIT1O00522 736 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 ERLIN2O94905 339 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 TMEM253P0C7T8 217 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 CCDC172P0C7W6 258 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 MYZAPP0CAP1 466 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 SOX5P35711 763 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 ICA1Q05084 483 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 HLTFQ14527 1009 aaKnown RBP eCLIP18.17■□□□□ 0.5
LIMS2-208ENST00000410011 PTGISQ16647 500 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 CEP85LQ5SZL2 805 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 SYDE2Q5VT97 1194 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 TCERG1LQ5VWI1 586 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 MICALCLQ6ZW33 695 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 OLIG1Q8TAK6 271 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 UIMC1Q96RL1 719 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 SYT11Q9BT88 431 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 AJAP1Q9UKB5 411 aaPredicted RBP18.17■□□□□ 0.5
LIMS2-208ENST00000410011 RSPH10B2B2RC85 870 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 RSPH10BP0C881 870 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 ATP1A2P50993 1020 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 CLUL1Q15846 466 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 C1orf186Q6ZWK4 172 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 KCND2Q9NZV8 630 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 AMFRQ9UKV5 643 aa18.17■□□□□ 0.5
LIMS2-208ENST00000410011 OPLAHO14841 1288 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 POU5F1Q01860 360 aaKnown RBP18.16■□□□□ 0.5
LIMS2-208ENST00000410011 PPATQ06203 517 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 PPP2R5AQ15172 486 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 UAP1Q16222 522 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-208ENST00000410011 AGBL2Q5U5Z8 902 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 TTC19Q6DKK2 380 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-208ENST00000410011 FAM186BQ8IYM0 893 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 FAM114A2Q9NRY5 505 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 DMAC2Q9NW81 257 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 IGLV3-22A0A075B6J6 115 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 DDTLA6NHG4 134 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-208ENST00000410011 TMCO5BA8MYB1 307 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 F8VZ95 297 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 MEFVO15553 781 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-208ENST00000410011 EVI5O60447 810 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 NPR1P16066 1061 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 HMGB2P26583 209 aaKnown RBP18.16■□□□□ 0.5
LIMS2-208ENST00000410011 ALDH1B1P30837 517 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 INPP5BP32019 993 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 ZNF131P52739 623 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 GALCP54803 685 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 SKIDA1Q1XH10 827 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 OTOP1Q7RTM1 612 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 SUGP1Q8IWZ8 645 aaKnown RBP18.16■□□□□ 0.5
LIMS2-208ENST00000410011 RFFLQ8WZ73 363 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 FAM198AQ9UFP1 575 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 PCDHB13Q9Y5F0 798 aa18.16■□□□□ 0.5
LIMS2-208ENST00000410011 ZMYM2Q9UBW7 1377 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 EML1O00423 815 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 FAM107AO95990 144 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 NDUFB10O96000 172 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 GUCY1A3Q02108 690 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 PPP2R5CQ13362 524 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 MYBPC2Q14324 1141 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 NAA35Q5VZE5 725 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 STXBP4Q6ZWJ1 553 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 DAAM2Q86T65 1068 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 MICALL1Q8N3F8 863 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 AP1M1Q9BXS5 423 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 FRMPD4Q14CM0 1322 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 CLIC2O15247 247 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 SLITRK3O94933 977 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 FAM13AO94988 1023 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 BMP3P12645 472 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 RFX1P22670 979 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 FMO5P49326 533 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 DOK7Q18PE1 504 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 SH3BP5LQ7L8J4 393 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 LNX1Q8TBB1 728 aaPredicted RBP18.15■□□□□ 0.5
LIMS2-208ENST00000410011 U2AF1L4Q8WU68 220 aaKnown RBP18.15■□□□□ 0.5
LIMS2-208ENST00000410011 GOLPH3Q9H4A6 298 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 PARVGQ9HBI0 331 aa18.15■□□□□ 0.5
LIMS2-208ENST00000410011 PSMD10O75832 226 aa18.14■□□□□ 0.49
LIMS2-208ENST00000410011 CTNNA1P35221 906 aaKnown RBP18.14■□□□□ 0.49
LIMS2-208ENST00000410011 HADHBP55084 474 aaKnown RBP18.14■□□□□ 0.49
LIMS2-208ENST00000410011 CYP4A11Q02928 519 aa18.14■□□□□ 0.49
LIMS2-208ENST00000410011 ZNF844Q08AG5 666 aa18.14■□□□□ 0.49
LIMS2-208ENST00000410011 KCNA1Q09470 495 aa18.14■□□□□ 0.49
LIMS2-208ENST00000410011 SLC9A9Q8IVB4 645 aa18.14■□□□□ 0.49
LIMS2-208ENST00000410011 ZNF473Q8WTR7 871 aaKnown RBP18.14■□□□□ 0.49
LIMS2-208ENST00000410011 TMEM174Q8WUU8 243 aa18.14■□□□□ 0.49
LIMS2-208ENST00000410011 GJD4Q96KN9 370 aaPredicted RBP18.14■□□□□ 0.49
LIMS2-208ENST00000410011 CCT8L2Q96SF2 557 aa18.14■□□□□ 0.49
LIMS2-208ENST00000410011 FIZ1Q96SL8 496 aa18.14■□□□□ 0.49
LIMS2-208ENST00000410011 NAP1L3Q99457 506 aaPredicted RBP18.14■□□□□ 0.49
LIMS2-208ENST00000410011 DDX47Q9H0S4 455 aaKnown RBP18.14■□□□□ 0.49
LIMS2-208ENST00000410011 CARD9Q9H257 536 aa18.14■□□□□ 0.49
LIMS2-208ENST00000410011 ADAMTSL1Q8N6G6 1762 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms