RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 FAM217BQ9NTX9 383 aaPredicted RBP14□□□□□ -0.17
PRAME-204ENST00000403441 PCDHGC5Q9Y5F6 944 aa14□□□□□ -0.17
PRAME-204ENST00000403441 PLXNA4Q9HCM2 1894 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 TMEM221A6NGB7 291 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 LOC730098B7Z3J9 87 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 C9IYK1 514 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 M0R296 226 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 C22orf31O95567 290 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 CPA1P15085 419 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 LAG3P18627 525 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 PSMA5P28066 241 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 CLK2P49760 499 aaKnown RBP13.99□□□□□ -0.17
PRAME-204ENST00000403441 SETQ01105 290 aaPredicted RBP13.99□□□□□ -0.17
PRAME-204ENST00000403441 PKN1Q16512 942 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 TRIM67Q6ZTA4 783 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 SUGP1Q8IWZ8 645 aaKnown RBP13.99□□□□□ -0.17
PRAME-204ENST00000403441 METTL13Q8N6R0 699 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 BBXQ8WY36 941 aaPredicted RBP13.99□□□□□ -0.17
PRAME-204ENST00000403441 PPP1R16BQ96T49 567 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 OSMRQ99650 979 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 ZNF577Q9BSK1 485 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 PHF7Q9BWX1 381 aaPredicted RBP13.99□□□□□ -0.17
PRAME-204ENST00000403441 CDHR5Q9HBB8 845 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 TBC1D22BQ9NU19 505 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 TMEM161AQ9NX61 479 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 NAP1L2Q9ULW6 460 aaPredicted RBP13.99□□□□□ -0.17
PRAME-204ENST00000403441 CEP131Q9UPN4 1083 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 TECTAO75443 2155 aa13.99□□□□□ -0.17
PRAME-204ENST00000403441 IGLV3-22A0A075B6J6 115 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 KLF18A0A0U1RQI7 1052 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 ZBTB42B2RXF5 422 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 FAM86B1E9PN63 330 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 PER2O15055 1255 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 HOXA2O43364 376 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 FAM86B2P0C5J1 330 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 FGFR1P11362 822 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 ANAPC15P60006 121 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 FGD1P98174 961 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 MAPK8IP2Q13387 824 aaPredicted RBP13.98□□□□□ -0.17
PRAME-204ENST00000403441 CBX2Q14781 532 aaPredicted RBP13.98□□□□□ -0.17
PRAME-204ENST00000403441 DUSP6Q16828 381 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 FAM102BQ5T8I3 360 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 JAKMIP3Q5VZ66 844 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 ZNF746Q6NUN9 644 aaPredicted RBP13.98□□□□□ -0.17
PRAME-204ENST00000403441 Q6ZUG5 572 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 RUFY3Q7L099 469 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 BMP8AQ7Z5Y6 402 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 SMAP1Q8IYB5 467 aaPredicted RBP13.98□□□□□ -0.17
PRAME-204ENST00000403441 ABI1Q8IZP0 508 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 REXO1Q8N1G1 1221 aaKnown RBP13.98□□□□□ -0.17
PRAME-204ENST00000403441 CCDC12Q8WUD4 166 aaPredicted RBP13.98□□□□□ -0.17
PRAME-204ENST00000403441 PBXIP1Q96AQ6 731 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 RPGRIP1Q96KN7 1286 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 FAM167AQ96KS9 214 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 MAP7D2Q96T17 732 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 ELAC1Q9H777 363 aaKnown RBP13.98□□□□□ -0.17
PRAME-204ENST00000403441 TYW1Q9NV66 732 aaKnown RBP13.98□□□□□ -0.17
PRAME-204ENST00000403441 PUF60Q9UHX1 559 aaKnown RBP13.98□□□□□ -0.17
PRAME-204ENST00000403441 LZTS1Q9Y250 596 aa13.98□□□□□ -0.17
PRAME-204ENST00000403441 FNDC1Q4ZHG4 1894 aaPredicted RBP13.97□□□□□ -0.17
PRAME-204ENST00000403441 CCDC196A0A1B0GTZ2 297 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 DHX15O43143 795 aaKnown RBP13.97□□□□□ -0.17
PRAME-204ENST00000403441 VTNP04004 478 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 PSAPP07602 524 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 CYP3A4P08684 503 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 ATF7P17544 494 aaPredicted RBP13.97□□□□□ -0.17
PRAME-204ENST00000403441 CDC27P30260 824 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 PPM1AP35813 382 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 ZXDAP98168 799 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 TOB2Q14106 344 aaPredicted RBP13.97□□□□□ -0.17
PRAME-204ENST00000403441 PFKFB3Q16875 520 aaPredicted RBP13.97□□□□□ -0.17
PRAME-204ENST00000403441 FAM228AQ86W67 206 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 BRF1Q92994 677 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 PRRX2Q99811 253 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 C6orf50Q9HD87 102 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 ENTPD7Q9NQZ7 604 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 SAMM50Q9Y512 469 aa13.97□□□□□ -0.17
PRAME-204ENST00000403441 MAFBQ9Y5Q3 323 aaPredicted RBP13.97□□□□□ -0.17
PRAME-204ENST00000403441 ESYT2A0FGR8 921 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 FSCN2O14926 492 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 MAGEB2O15479 319 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 GPR32O75388 356 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 ATP4AP20648 1035 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 TMOD1P28289 359 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 METAP2P50579 478 aaKnown RBP eCLIP13.96□□□□□ -0.17
PRAME-204ENST00000403441 PTPN5P54829 565 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 ERVFC1P60507 584 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 PRR16Q569H4 304 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 PLPP4Q5VZY2 271 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 TRMT1LQ7Z2T5 733 aaKnown RBP13.96□□□□□ -0.17
PRAME-204ENST00000403441 ZNF710Q8N1W2 664 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 LRRC43Q8N309 656 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 VN1R2Q8NFZ6 395 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 CRYGNQ8WXF5 182 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 MRPS27Q92552 414 aaKnown RBP13.96□□□□□ -0.17
PRAME-204ENST00000403441 ZNF558Q96NG5 402 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 TCF25Q9BQ70 676 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 TMEM117Q9H0C3 514 aa13.96□□□□□ -0.17
PRAME-204ENST00000403441 HCSTQ9UBK5 93 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms