RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 CCDC127Q96BQ5 260 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 TEKT3Q9BXF9 490 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 VIPAS39Q9H9C1 493 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 CTTNBP2NLQ9P2B4 639 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 EP400Q96L91 3159 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 SCN7AQ01118 1682 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 GOLGA8IPA6NC78 632 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 GOLGA8JA6NMD2 632 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 KIAA0754O94854 1291 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 PDCLQ13371 301 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 NNTQ13423 1086 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 DRAP1Q14919 205 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-201ENST00000401921 ZCWPW2Q504Y3 356 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 COBLL1Q53SF7 1204 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 EMBQ6PCB8 327 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 SH3BP5LQ7L8J4 393 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 CNKSR1Q969H4 720 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 NACC1Q96RE7 527 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 CCDC113Q9H0I3 377 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 KCTD10Q9H3F6 313 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 NAGPAQ9UK23 515 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 SPATA31C1P0DKV0 1188 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 GAP43P17677 238 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 CALRP27797 417 aaKnown RBP8.37□□□□□ -1.07
HDAC9-201ENST00000401921 SREBF1P36956 1147 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 DACT2Q5SW24 774 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 RNF187Q5TA31 235 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-201ENST00000401921 ZNF662Q6ZS27 426 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 MICALL1Q8N3F8 863 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 ARL8AQ96BM9 186 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 EHD4Q9H223 541 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 RNF14Q9UBS8 474 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 CHORDC1Q9UHD1 332 aaPredicted RBP8.37□□□□□ -1.07
HDAC9-201ENST00000401921 STK24Q9Y6E0 443 aa8.37□□□□□ -1.07
HDAC9-201ENST00000401921 GOLGA8KD6RF30 607 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 IPO5O00410 1097 aaKnown RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 TBX3O15119 743 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 RAD51CO43502 376 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 EVI5O60447 810 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 KIF4AO95239 1232 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 FERP16591 822 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 SSR1P43307 286 aaKnown RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 MAGEA9P43362 315 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 PRELPP51888 382 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 MYL7Q01449 175 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 ZNF211Q13398 564 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 ZNF746Q6NUN9 644 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 PACS2Q86VP3 889 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 PPM1KQ8N3J5 372 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 CCDC26Q8TAB7 109 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 ETNPPLQ8TBG4 499 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 ZIM3Q96PE6 472 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 PURBQ96QR8 312 aaKnown RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 P2RX7Q99572 595 aaKnown RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 LXNQ9BS40 222 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 UBXN6Q9BZV1 441 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 UBE2TQ9NPD8 197 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 PSD3Q9NYI0 1048 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 LARSQ9P2J5 1176 aaKnown RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 AMACRQ9UHK6 382 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 SRCAPQ6ZRS2 3230 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 NAV1Q8NEY1 1877 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 TESPA1A2RU30 521 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 GRID2IPA4D2P6 1211 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 PGRMC1O00264 195 aaKnown RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 FAM153BP0C7A2 387 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 ARP10275 920 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 PRLRP16471 622 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 EIF2AK2P19525 551 aaKnown RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 CTNNA1P35221 906 aaKnown RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 GALCP54803 685 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 MAP2K1Q02750 393 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 PPP2R5AQ15172 486 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 TRADDQ15628 312 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 FAM153CQ494X1 144 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 CEP55Q53EZ4 464 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 LRRC31Q6UY01 552 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 UHMK1Q8TAS1 419 aaKnown RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 RNF217Q8TC41 542 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 ZNF277Q9NRM2 450 aaPredicted RBP8.36□□□□□ -1.07
HDAC9-201ENST00000401921 FAM153AQ9UHL3 310 aa8.36□□□□□ -1.07
HDAC9-201ENST00000401921 PJA2O43164 708 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 HOXA7P31268 230 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-201ENST00000401921 GCLMP48507 274 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 JAG1P78504 1218 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 FAM102BQ5T8I3 360 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 LDHDQ86WU2 507 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 SYCE1Q8N0S2 351 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 SYN2Q92777 582 aaPredicted RBP8.35□□□□□ -1.07
HDAC9-201ENST00000401921 MKL1Q969V6 931 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 BICD1Q96G01 975 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 PLCD4Q9BRC7 762 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 TMEM39BQ9GZU3 492 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 PPANQ9NQ55 473 aaKnown RBP8.35□□□□□ -1.07
HDAC9-201ENST00000401921 UTP11Q9Y3A2 253 aaKnown RBP8.35□□□□□ -1.07
HDAC9-201ENST00000401921 MYO3BQ8WXR4 1341 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 BTAF1O14981 1849 aa8.35□□□□□ -1.07
HDAC9-201ENST00000401921 GOLGA6L10A0A0M3HER8 536 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms