RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 UIMC1Q96RL1 719 aa22.97■■□□□ 1.27
UPF3A-202ENST00000375299 SUFUQ9UMX1 484 aa22.97■■□□□ 1.27
UPF3A-202ENST00000375299 DIS3Q9Y2L1 958 aaKnown RBP22.97■■□□□ 1.27
UPF3A-202ENST00000375299 NCANO14594 1321 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 CCT8L1PA6NM43 557 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 PPIP5K2O43314 1243 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 EZRP15311 586 aaKnown RBP22.96■■□□□ 1.27
UPF3A-202ENST00000375299 TCERG1LQ5VWI1 586 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 GPR101Q96P66 508 aaPredicted RBP22.96■■□□□ 1.27
UPF3A-202ENST00000375299 ZNF317Q96PQ6 595 aaPredicted RBP22.96■■□□□ 1.27
UPF3A-202ENST00000375299 EPB41L4BQ9H329 900 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 NR2E1Q9Y466 385 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 PDXKO00764 312 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 DDX3YO15523 660 aaKnown RBP22.96■■□□□ 1.27
UPF3A-202ENST00000375299 BUB1BO60566 1050 aaPredicted RBP22.96■■□□□ 1.27
UPF3A-202ENST00000375299 AKAP3O75969 853 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 CHN1P15882 459 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 PLCG2P16885 1265 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 HOXD13P35453 343 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 MSL1Q68DK7 614 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 DUPD1Q68J44 220 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 GJB7Q6PEY0 223 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 EPM2AIP1Q7L775 607 aaPredicted RBP22.96■■□□□ 1.27
UPF3A-202ENST00000375299 LNX1Q8TBB1 728 aaPredicted RBP22.96■■□□□ 1.27
UPF3A-202ENST00000375299 METTL14Q9HCE5 456 aaKnown RBP22.96■■□□□ 1.27
UPF3A-202ENST00000375299 OSGEPQ9NPF4 335 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 ZDHHC18Q9NUE0 388 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 GCNT4Q9P109 453 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 CEP83Q9Y592 693 aa22.96■■□□□ 1.27
UPF3A-202ENST00000375299 POTEFA5A3E0 1075 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 GFPT2O94808 682 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 SHBGP04278 402 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 POTEIP0CG38 1075 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 DR1Q01658 176 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 GIT2Q14161 759 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 PPP2R5EQ16537 467 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 POTEGQ6S5H5 508 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 POTEEQ6S8J3 1075 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 MXD3Q9BW11 206 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 VEZTQ9HBM0 779 aa22.95■■□□□ 1.26
UPF3A-202ENST00000375299 ZNF543Q08ER8 600 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 NBPF9Q3BBW0 867 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 DCAF12L1Q5VU92 463 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 SFR1Q86XK3 245 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 ANKS4BQ8N8V4 417 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 NEK9Q8TD19 979 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 ERP44Q9BS26 406 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 KCNMB3Q9NPA1 279 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 ATF5Q9Y2D1 282 aaPredicted RBP22.94■■□□□ 1.26
UPF3A-202ENST00000375299 SLC16A3O15427 465 aaKnown RBP22.94■■□□□ 1.26
UPF3A-202ENST00000375299 ASAP2O43150 1006 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 MMEP08473 750 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 STAT3P40763 770 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 MMP13P45452 471 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 PMS2P54278 862 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 EIF6P56537 245 aaKnown RBP22.94■■□□□ 1.26
UPF3A-202ENST00000375299 RHBDL3P58872 404 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 ELF3P78545 371 aaPredicted RBP22.94■■□□□ 1.26
UPF3A-202ENST00000375299 VPS72Q15906 364 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 SLC30A5Q8TAD4 765 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 ATXN2LQ8WWM7 1075 aaKnown RBP22.94■■□□□ 1.26
UPF3A-202ENST00000375299 RFFLQ8WZ73 363 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 SLC35C1Q96A29 364 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 PGM2Q96G03 612 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 SELENOSQ9BQE4 189 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 PABPC3Q9H361 631 aaKnown RBP22.94■■□□□ 1.26
UPF3A-202ENST00000375299 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.94■■□□□ 1.26
UPF3A-202ENST00000375299 DAAM1Q9Y4D1 1078 aa22.94■■□□□ 1.26
UPF3A-202ENST00000375299 FOCADQ5VW36 1801 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 FAM187AA6NFU0 413 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 SPDYE3A6NKU9 549 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 IBSPP21815 317 aaPredicted RBP22.93■■□□□ 1.26
UPF3A-202ENST00000375299 STAT1P42224 750 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 ITIH4Q14624 930 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 OLIG1Q8TAK6 271 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 SLC35G2Q8TBE7 412 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 PSTPIP2Q9H939 334 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 GOPCQ9HD26 462 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 TYW1Q9NV66 732 aaKnown RBP22.93■■□□□ 1.26
UPF3A-202ENST00000375299 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.93■■□□□ 1.26
UPF3A-202ENST00000375299 PPP1R9AQ9ULJ8 1098 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 GOLGA6L10A0A0M3HER8 536 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 NR3C1P04150 777 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 GSTA1P08263 222 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 TMEM253P0C7T8 217 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 RFC4P35249 363 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 PPATQ06203 517 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 PRPF4BQ13523 1007 aaKnown RBP22.93■■□□□ 1.26
UPF3A-202ENST00000375299 E2F5Q15329 346 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 C15orf52Q6ZUT6 534 aaKnown RBP22.93■■□□□ 1.26
UPF3A-202ENST00000375299 TEX2Q8IWB9 1127 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 NAP1L3Q99457 506 aaPredicted RBP22.93■■□□□ 1.26
UPF3A-202ENST00000375299 CARD9Q9H257 536 aa22.93■■□□□ 1.26
UPF3A-202ENST00000375299 GTPBP10A4D1E9 387 aaKnown RBP22.92■■□□□ 1.26
UPF3A-202ENST00000375299 CCDC169A6NNP5 214 aa22.92■■□□□ 1.26
UPF3A-202ENST00000375299 KLRC3Q07444 240 aa22.92■■□□□ 1.26
UPF3A-202ENST00000375299 DENND2CQ68D51 928 aa22.92■■□□□ 1.26
UPF3A-202ENST00000375299 REEP2Q9BRK0 252 aa22.92■■□□□ 1.26
UPF3A-202ENST00000375299 ADAM7Q9H2U9 754 aa22.92■■□□□ 1.26
UPF3A-202ENST00000375299 ATP6V0A4Q9HBG4 840 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms