RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 BEND6Q5SZJ8 279 aaPredicted RBP14.75□□□□□ -0.05
VCP-201ENST00000358901 NOA1Q8NC60 698 aaKnown RBP14.75□□□□□ -0.05
VCP-201ENST00000358901 DYDC2Q96IM9 177 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 TDRD3Q9H7E2 651 aaKnown RBP14.75□□□□□ -0.05
VCP-201ENST00000358901 CROCC2H7BZ55 1655 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 SH3BP5O60239 455 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 CSF1RP07333 972 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 CYP2C19P33261 490 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 ASPHQ12797 758 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 ICE2Q659A1 982 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 SH2D3CQ8N5H7 860 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 CCHCR1Q8TD31 782 aa14.75□□□□□ -0.05
VCP-201ENST00000358901 ZNF335Q9H4Z2 1342 aaPredicted RBP14.75□□□□□ -0.05
VCP-201ENST00000358901 TARSL2A2RTX5 802 aaKnown RBP14.74□□□□□ -0.05
VCP-201ENST00000358901 CENPUQ71F23 418 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 ZNF710Q8N1W2 664 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 KCTD6Q8NC69 237 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 DCAF4Q8WV16 495 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 SAYSD1Q9NPB0 183 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 CPS1P31327 1500 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 AP5Z1O43299 807 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 GPC4O75487 556 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 AKR1B1P15121 316 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 CRKP46108 304 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 PPP2R2AP63151 447 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 GUCY1A3Q02108 690 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 TFDP1Q14186 410 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 MIS18BP1Q6P0N0 1132 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 HACE1Q8IYU2 909 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 GSDMBQ8TAX9 411 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 MS4A14Q96JA4 679 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 ATP6V1G3Q96LB4 118 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 FUCA2Q9BTY2 467 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 GINM1Q9NU53 330 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 FBXL5Q9UKA1 691 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 DIS3Q9Y2L1 958 aaKnown RBP14.74□□□□□ -0.05
VCP-201ENST00000358901 NOC2LQ9Y3T9 749 aaKnown RBP14.74□□□□□ -0.05
VCP-201ENST00000358901 OVOS2A0A0J9YW53 1432 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 OVOS2Q6IE36 1432 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 UBE2Q2LH0YL09 131 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 CHUKO15111 745 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 GSTA1P08263 222 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 GSTA2P09210 222 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 ZSCAN20P17040 1043 aaPredicted RBP14.74□□□□□ -0.05
VCP-201ENST00000358901 DBN1Q16643 649 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 MYO3AQ8NEV4 1616 aa14.74□□□□□ -0.05
VCP-201ENST00000358901 RASA4BC9J798 803 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 RASA4O43374 803 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 NKX1-1Q15270 411 aaPredicted RBP14.73□□□□□ -0.05
VCP-201ENST00000358901 TAF11Q15544 211 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 OR6B2Q6IFH4 312 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 PPP1R2P3Q6NXS1 205 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 TPX2Q9ULW0 747 aaKnown RBP14.73□□□□□ -0.05
VCP-201ENST00000358901 SLC16A4O15374 487 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 RHOBTB3O94955 611 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 SRGAP2CP0DJJ0 459 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 GARSP41250 739 aaKnown RBP14.73□□□□□ -0.05
VCP-201ENST00000358901 PRELPP51888 382 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 PMS2P54278 862 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 PASD1Q8IV76 773 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 N4BP2L2Q92802 583 aaPredicted RBP14.73□□□□□ -0.05
VCP-201ENST00000358901 C11orf70Q9BRQ4 267 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 ZNF341Q9BYN7 854 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 TTC7AQ9ULT0 858 aaPredicted RBP14.73□□□□□ -0.05
VCP-201ENST00000358901 ITIH6Q6UXX5 1313 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 ECE1P42892 770 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 KCTD2Q14681 263 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 FAM47CQ5HY64 1035 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 TRIM42Q8IWZ5 723 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 DCLK2Q8N568 766 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 GBP7Q8N8V2 638 aaPredicted RBP14.73□□□□□ -0.05
VCP-201ENST00000358901 DNAAF3Q8N9W5 541 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 KCNB2Q92953 911 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 MSTO1Q9BUK6 570 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.73□□□□□ -0.05
VCP-201ENST00000358901 AKT3Q9Y243 479 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 GRID2IPA4D2P6 1211 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 TLR3O15455 904 aaKnown RBP14.73□□□□□ -0.05
VCP-201ENST00000358901 MMP10P09238 476 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 NLRP14Q86W24 1093 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 ERICH1Q86X53 443 aa14.73□□□□□ -0.05
VCP-201ENST00000358901 MAGED2Q9UNF1 606 aaPredicted RBP14.73□□□□□ -0.05
VCP-201ENST00000358901 KCNQ2O43526 872 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 ESRRAP11474 423 aaPredicted RBP14.72□□□□□ -0.05
VCP-201ENST00000358901 PLS3P13797 630 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 ITKQ08881 620 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 RCSD1Q6JBY9 416 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 PPP1R18Q6NYC8 613 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 CCNI2Q6ZMN8 369 aaPredicted RBP14.72□□□□□ -0.05
VCP-201ENST00000358901 RNF207Q6ZRF8 634 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 RAPH1Q70E73 1250 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 MARCH10Q8NA82 808 aaPredicted RBP14.72□□□□□ -0.05
VCP-201ENST00000358901 ZWILCHQ9H900 591 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 IFT122Q9HBG6 1241 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 ASNSP08243 561 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 SMIM5Q71RC9 77 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 PCGF5Q86SE9 256 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 RPAINQ86UA6 219 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 THNSL1Q8IYQ7 743 aa14.72□□□□□ -0.05
VCP-201ENST00000358901 RNF25Q96BH1 459 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms