RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 HEY1Q9Y5J3 304 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 RASSF3Q86WH2 238 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 PCDHA13Q9Y5I0 950 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 WBP4O75554 376 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 KCNA6P17658 529 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 SLC16A2P36021 539 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 LRRC8BQ6P9F7 803 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 THOC1Q96FV9 657 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 RWDD2BP57060 319 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 NNTQ13423 1086 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 HIBCHQ6NVY1 386 aaPredicted RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 VPS11Q9H270 941 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 EMILIN3Q9NT22 766 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 NOP53Q9NZM5 478 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 KRT37O76014 449 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 POU5F1BQ06416 359 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 BEST2Q8NFU1 509 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 DOLKQ9UPQ8 538 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 PLB1Q6P1J6 1458 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 MAP4P27816 1152 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 PI4KBQ9UBF8 816 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 PRAMEP78395 509 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 ALCAMQ13740 583 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 DEPDC1Q5TB30 811 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 FBXL5Q9UKA1 691 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 RRP15Q9Y3B9 282 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 MRPS15P82914 257 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 CUL1Q13616 776 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 MEI1Q5TIA1 1274 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 UBA6A0AVT1 1052 aaPredicted RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 GOLGA8MH3BSY2 632 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 DIAPH2O60879 1101 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 CAPZA2P47755 286 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 SEPT2Q15019 361 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 NAALADL2Q58DX5 795 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 CCNYL1Q8N7R7 359 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 TDRD7Q8NHU6 1098 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 ANAPC7Q9UJX3 599 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 TRAF3IP3Q9Y228 551 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 SLFN12LQ6IEE8 588 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 COA7Q96BR5 231 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 GCOM2Q9BZD3 368 aaPredicted RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 POTEB3A0JP26 581 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 AP2B1P63010 937 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 AP1B1Q10567 949 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 TBC1D9BQ66K14 1250 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 POTEBQ6S5H4 581 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 ELAC2Q9BQ52 826 aaKnown RBP6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 ATP6V0A4Q9HBG4 840 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 GOLGA8IPA6NC78 632 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 GOLGA8JA6NMD2 632 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 CYP26B1Q9NR63 512 aa6.17□□□□□ -1.42
SRGAP1-201ENST00000355086 UBE3AQ05086 875 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 ZNF394Q53GI3 561 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 NUGGCQ68CJ6 796 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 PKN3Q6P5Z2 889 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 FOPNLQ96NB1 174 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 NESP48681 1621 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 ICA1LQ8NDH6 482 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 ZFP42Q96MM3 310 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 DDX28Q9NUL7 540 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 MTMR6Q9Y217 621 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 DCUN1D1Q96GG9 259 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 MAN1B1Q9UKM7 699 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 SPDYE5A6NIY4 337 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 CLDN3O15551 220 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 ZNF699Q32M78 642 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 SPDYE7PQ495Y7 208 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 MIGA2Q7L4E1 593 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 RHOT2Q8IXI1 618 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 TTC13Q8NBP0 860 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 SLC13A1Q9BZW2 595 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 ZSWIM6Q9HCJ5 1215 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 SLC9A1P19634 815 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 FASTKD1Q53R41 847 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 PASD1Q8IV76 773 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 TBC1D19Q8N5T2 526 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 FAM96AQ9H5X1 160 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 C6orf203Q9P0P8 240 aaPredicted RBP6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 GDAQ9Y2T3 454 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 ANO5Q75V66 913 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 KIAA2013Q8IYS2 634 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 A0A1B0GW55 424 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 DUX4L2P0CJ85 424 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 DUX4L3P0CJ86 424 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 DUX4L4P0CJ87 422 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 DUX4L5P0CJ88 424 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 DUX4L6P0CJ89 424 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 DUX4L7P0CJ90 424 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 ZNF667Q5HYK9 610 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 EXOC4Q96A65 974 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 OPTNQ96CV9 577 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 RBM41Q96IZ5 413 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 EML4Q9HC35 981 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 DUX4Q9UBX2 424 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 ATP11BQ9Y2G3 1177 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 PCF11O94913 1555 aaKnown RBP6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 VCAM1P19320 739 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 PEX3P56589 373 aa6.16□□□□□ -1.42
SRGAP1-201ENST00000355086 ZNF713Q8N859 430 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms