RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 MT-ND3P03897 115 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 PMS2P54278 862 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 EMBQ6PCB8 327 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 ERICH1Q86X53 443 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 FMO2Q99518 471 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 TRIM9Q9C026 710 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 DENND3A2RUS2 1198 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 KCNB1Q14721 858 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 SLMAPQ14BN4 828 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 MAP7D3Q8IWC1 876 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 SLC17A8Q8NDX2 589 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 RIN2Q8WYP3 895 aaPredicted RBP9.33□□□□□ -0.92
FGD6-201ENST00000343958 FAM20AQ96MK3 541 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 FUCA2Q9BTY2 467 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 MRPL47Q9HD33 250 aaKnown RBP9.33□□□□□ -0.92
FGD6-201ENST00000343958 CCDC38Q502W7 563 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 CCDC117Q8IWD4 279 aaPredicted RBP9.33□□□□□ -0.92
FGD6-201ENST00000343958 NLRP7Q8WX94 980 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 ANKRD7Q92527 254 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 ZNF512BQ96KM6 892 aaPredicted RBP9.33□□□□□ -0.92
FGD6-201ENST00000343958 FEM1BQ9UK73 627 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 FTLP02792 175 aaPredicted RBP9.33□□□□□ -0.92
FGD6-201ENST00000343958 P4HBP07237 508 aaKnown RBP9.33□□□□□ -0.92
FGD6-201ENST00000343958 OSBPP22059 807 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 PDE1BQ01064 536 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 LRRC14Q15048 493 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 SLC27A3Q5K4L6 730 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 REXO1L1PQ8IX06 675 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 RHOT2Q8IXI1 618 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 PROM2Q8N271 834 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 MICAL1Q8TDZ2 1067 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 MAP3K14Q99558 947 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 F5H423 210 aaPredicted RBP9.33□□□□□ -0.92
FGD6-201ENST00000343958 NOL3O60936 208 aaKnown RBP9.33□□□□□ -0.92
FGD6-201ENST00000343958 GJB7Q6PEY0 223 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 SMYD2Q9NRG4 433 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 SCAF8Q9UPN6 1271 aaKnown RBP9.33□□□□□ -0.92
FGD6-201ENST00000343958 FLT1P17948 1338 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 GOLGA8MH3BSY2 632 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 PPP4R1Q8TF05 950 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 KLHL29Q96CT2 875 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 GABBR1Q9UBS5 961 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 DLC1Q96QB1 1528 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 SPHKAPQ2M3C7 1700 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 KIF1BO60333 1816 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 LMNB2Q03252 620 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 CDC42EP5Q6NZY7 148 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 ZNF449Q6P9G9 518 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 ZNF564Q8TBZ8 553 aaPredicted RBP9.33□□□□□ -0.92
FGD6-201ENST00000343958 MTMR4Q9NYA4 1195 aa9.33□□□□□ -0.92
FGD6-201ENST00000343958 HP1BP3Q5SSJ5 553 aaPredicted RBP9.32□□□□□ -0.92
FGD6-201ENST00000343958 C1orf54Q8WWF1 131 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 NLRP4Q96MN2 994 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 SPZ1Q9BXG8 430 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 FIS1Q9Y3D6 152 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 HMGB1P1B2RPK0 211 aaPredicted RBP9.32□□□□□ -0.92
FGD6-201ENST00000343958 RHOBTB3O94955 611 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 HSPA6P17066 643 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 RXRBP28702 533 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 CHRNA5P30532 468 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 HIBCHQ6NVY1 386 aaPredicted RBP9.32□□□□□ -0.92
FGD6-201ENST00000343958 XXYLT1Q8NBI6 393 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 SLC38A10Q9HBR0 1119 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 AFG3L2Q9Y4W6 797 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 CCDC188H7C350 402 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 MYO1CO00159 1063 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 CPP00450 1065 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 DPP9Q86TI2 863 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 CFAP57Q96MR6 1250 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 PNMA2Q9UL42 364 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 GARSP41250 739 aaKnown RBP9.32□□□□□ -0.92
FGD6-201ENST00000343958 MAGOHP61326 146 aaKnown RBP9.32□□□□□ -0.92
FGD6-201ENST00000343958 GLE1Q53GS7 698 aaKnown RBP9.32□□□□□ -0.92
FGD6-201ENST00000343958 RMDN3Q96TC7 470 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 LXNQ9BS40 222 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 TRIM51Q9BSJ1 452 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 NUP85Q9BW27 656 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 ADAM22Q9P0K1 906 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 FHOD1Q9Y613 1164 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 PRR5LQ6MZQ0 368 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 ATP2A3Q93084 1043 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 RNF146Q9NTX7 359 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 TTC7AQ9ULT0 858 aaPredicted RBP9.32□□□□□ -0.92
FGD6-201ENST00000343958 EXOC1LA0A1B0GW35 172 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 ZNF543Q08ER8 600 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 CUL1Q13616 776 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 FBXO33Q7Z6M2 555 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 AFAP1L2Q8N4X5 818 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 ATP6V0A4Q9HBG4 840 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 FBXL5Q9UKA1 691 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 CYP26A1O43174 497 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 SMAD1Q15797 465 aaKnown RBP9.32□□□□□ -0.92
FGD6-201ENST00000343958 TTLL6Q8N841 843 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 OR2W6PQ8NHA6 318 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 SNX25Q9H3E2 840 aa9.32□□□□□ -0.92
FGD6-201ENST00000343958 K7ERI5 159 aa9.31□□□□□ -0.92
FGD6-201ENST00000343958 GMNNO75496 209 aa9.31□□□□□ -0.92
FGD6-201ENST00000343958 TOM1L1O75674 476 aa9.31□□□□□ -0.92
FGD6-201ENST00000343958 GYPCP04921 128 aa9.31□□□□□ -0.92
FGD6-201ENST00000343958 EPHA7Q15375 998 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms