RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 CYP3A7P24462 503 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 RPA1P27694 616 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 INPP5BP32019 993 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 DACT2Q5SW24 774 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 PPP4R3CPQ6ZMV5 832 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 GLYCTKQ8IVS8 523 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 LNX1Q8TBB1 728 aaPredicted RBP13.43□□□□□ -0.26
VPS33B-201ENST00000333371 UBLCP1Q8WVY7 318 aaPredicted RBP13.43□□□□□ -0.26
VPS33B-201ENST00000333371 CCDC17Q96LX7 622 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 PLCB1Q9NQ66 1216 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 FBXL5Q9UKA1 691 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 MYH11P35749 1972 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 PGRMC1O00264 195 aaKnown RBP13.43□□□□□ -0.26
VPS33B-201ENST00000333371 TGFB1I1O43294 461 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 PPP1R37O75864 691 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 TMOD1P28289 359 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 GALCP54803 685 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 UBXN2AP68543 259 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 JAG1P78504 1218 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 PTGISQ16647 500 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 SLFN12Q8IYM2 578 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 SPICE1Q8N0Z3 855 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 ZNF473Q8WTR7 871 aaKnown RBP13.43□□□□□ -0.26
VPS33B-201ENST00000333371 MBOAT7Q96N66 472 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 TRIM51Q9BSJ1 452 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 E7EVH7 732 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 H0YGN5 161 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 MYO1FO00160 1098 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 EVI5O60447 810 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 H2AFZP0C0S5 128 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 CTNNA1P35221 906 aaKnown RBP13.42□□□□□ -0.26
VPS33B-201ENST00000333371 MDH1P40925 334 aaKnown RBP13.42□□□□□ -0.26
VPS33B-201ENST00000333371 JAM2P57087 298 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 FKBP1AP62942 108 aaKnown RBP13.42□□□□□ -0.26
VPS33B-201ENST00000333371 SLC15A2Q16348 729 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 H2AFVQ71UI9 128 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 PALB2Q86YC2 1186 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 OLIG1Q8TAK6 271 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.42□□□□□ -0.263e-6■■■□□ 18.7
VPS33B-201ENST00000333371 EPN3Q9H201 632 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 EFCC1Q9HA90 598 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 TMBIM4Q9HC24 238 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 NFS1Q9Y697 457 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 PDXKO00764 312 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 OPLAHO14841 1288 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 CALUO43852 315 aaPredicted RBP13.42□□□□□ -0.26
VPS33B-201ENST00000333371 FLOT1O75955 427 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 CPP00450 1065 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 TRIM49P0CI25 452 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 TRIM49CP0CI26 452 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 ZNF844Q08AG5 666 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 CERKLQ49MI3 558 aaPredicted RBP13.42□□□□□ -0.26
VPS33B-201ENST00000333371 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 SH3BP5LQ7L8J4 393 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 NT5DC3Q86UY8 548 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 CD302Q8IX05 232 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 ACTRT1Q8TDG2 376 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 CCT8L2Q96SF2 557 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 MRIQ9BWK5 157 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 TYW1Q9NV66 732 aaKnown RBP13.42□□□□□ -0.26
VPS33B-201ENST00000333371 PI4KBQ9UBF8 816 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 VAV3Q9UKW4 847 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 PPP1R9AQ9ULJ8 1098 aa13.42□□□□□ -0.26
VPS33B-201ENST00000333371 ZMYM2Q9UBW7 1377 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 SPDYE3A6NKU9 549 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 F5H6K3 240 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 BUB1BO60566 1050 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-201ENST00000333371 LRRN2O75325 713 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 TBCAO75347 108 aaKnown RBP13.41□□□□□ -0.26
VPS33B-201ENST00000333371 PRKCIP41743 596 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 EN1Q05925 392 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-201ENST00000333371 KLRC3Q07444 240 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 PRPF4BQ13523 1007 aaKnown RBP13.41□□□□□ -0.26
VPS33B-201ENST00000333371 ICE2Q659A1 982 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 NLRP14Q86W24 1093 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 MYCBPAPQ8TBZ2 947 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 PBKQ96KB5 322 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 EIF2AK1Q9BQI3 630 aaKnown RBP13.41□□□□□ -0.26
VPS33B-201ENST00000333371 TAS2R14Q9NYV8 317 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 CHORDC1Q9UHD1 332 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-201ENST00000333371 NENFQ9UMX5 172 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 CAPN7Q9Y6W3 813 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 BTNL10A8MVZ5 291 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 TULP1O00294 542 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-201ENST00000333371 PPIP5K2O43314 1243 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 HOXA7P31268 230 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-201ENST00000333371 ZNF211Q13398 564 aaPredicted RBP13.41□□□□□ -0.26
VPS33B-201ENST00000333371 DCAF12L1Q5VU92 463 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 RINT1Q6NUQ1 792 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 AADACL2Q6P093 401 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 KCNV1Q6PIU1 500 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 TPH2Q8IWU9 490 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 RDH13Q8NBN7 331 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 CNOT8Q9UFF9 292 aaKnown RBP13.41□□□□□ -0.26
VPS33B-201ENST00000333371 SERPINA10Q9UK55 444 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 STXBP5LQ9Y2K9 1186 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 RABGAP1Q9Y3P9 1069 aa13.41□□□□□ -0.26
VPS33B-201ENST00000333371 FGGP02679 453 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 ZNF76P36508 570 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 CYP2J2P51589 502 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms