RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CELA3BP08861 270 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 CETPP11597 493 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 PDIA4P13667 645 aaKnown RBP5.76□□□□□ -1.49
CKS1B-201ENST00000308987 FGFR2P21802 821 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 PDE1AP54750 535 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 HDLBPQ00341 1268 aaKnown RBP5.76□□□□□ -1.49
CKS1B-201ENST00000308987 CCDC57Q2TAC2 916 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 RABL6Q3YEC7 729 aaPredicted RBP5.76□□□□□ -1.49
CKS1B-201ENST00000308987 FKBP1CQ5VVH2 108 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 LRSAM1Q6UWE0 723 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 FAM83AQ86UY5 434 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 IRF2BP1Q8IU81 584 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 SYAP1Q96A49 352 aaPredicted RBP5.76□□□□□ -1.49
CKS1B-201ENST00000308987 ZDHHC15Q96MV8 337 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 SGPP1Q9BX95 441 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 BICC1Q9H694 974 aaKnown RBP5.76□□□□□ -1.49
CKS1B-201ENST00000308987 SRRDQ9UH36 339 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 ZNF112Q9UJU3 913 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 NOL7Q9UMY1 257 aaKnown RBP5.76□□□□□ -1.49
CKS1B-201ENST00000308987 GABRQQ9UN88 632 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 ATRNL1Q5VV63 1379 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 RPAP1Q9BWH6 1393 aaPredicted RBP5.76□□□□□ -1.49
CKS1B-201ENST00000308987 DDX60LQ5H9U9 1706 aaKnown RBP5.76□□□□□ -1.49
CKS1B-201ENST00000308987 OTOL1A6NHN0 477 aaPredicted RBP5.75□□□□□ -1.49
CKS1B-201ENST00000308987 PDHXO00330 501 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 ALDH1L1O75891 902 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 BRD1O95696 1058 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 CCL5P13501 91 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 BMP6P22004 513 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 MSNP26038 577 aaKnown RBP5.75□□□□□ -1.49
CKS1B-201ENST00000308987 PSMC4P43686 418 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 RFX5P48382 616 aaPredicted RBP5.75□□□□□ -1.49
CKS1B-201ENST00000308987 ATP8B2P98198 1209 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 SNAPC2Q13487 334 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 SLBPQ14493 270 aaKnown RBP eCLIP5.75□□□□□ -1.49
CKS1B-201ENST00000308987 HSP90AA2PQ14568 343 aaPredicted RBP5.75□□□□□ -1.49
CKS1B-201ENST00000308987 ZSCAN23Q3MJ62 389 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 TAF7LQ5H9L4 462 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 CDC42EP5Q6NZY7 148 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 LLGL2Q6P1M3 1020 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 TMPRSS7Q7RTY8 843 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 TMEM151BQ8IW70 566 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 TEKT1Q969V4 418 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 MAP7D2Q96T17 732 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 MEIS3Q99687 375 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 ARID3AQ99856 593 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 MRIQ9BWK5 157 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 LRRCC1Q9C099 1032 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 SLC6A17Q9H1V8 727 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 FBRSQ9HAH7 460 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 ZCCHC17Q9NP64 241 aaKnown RBP5.75□□□□□ -1.49
CKS1B-201ENST00000308987 C9orf78Q9NZ63 289 aaPredicted RBP5.75□□□□□ -1.49
CKS1B-201ENST00000308987 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.75□□□□□ -1.49
CKS1B-201ENST00000308987 FOCADQ5VW36 1801 aa5.75□□□□□ -1.49
CKS1B-201ENST00000308987 CHD9Q3L8U1 2897 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 SMCHD1A6NHR9 2005 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 NCOR1O75376 2440 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 TEX51A0A1B0GUA7 166 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 WASH4PA8MWX3 477 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 RAB11FIP3O75154 756 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 LETM1O95202 739 aaPredicted RBP5.74□□□□□ -1.49
CKS1B-201ENST00000308987 PDE8BO95263 885 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 GJB1P08034 283 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 CYP2C8P10632 490 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 PRDX5P30044 214 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 GRK4P32298 578 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 GJA8P48165 433 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 TNNI2P48788 182 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 PRKCZQ05513 592 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 PPATQ06203 517 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 TNK2Q07912 1038 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 TCP10Q12799 353 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 SSPNQ14714 243 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 SLC4A10Q6U841 1118 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 HHIPL2Q6UWX4 724 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 ATG9AQ7Z3C6 839 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 MTERF4Q7Z6M4 381 aaKnown RBP5.74□□□□□ -1.49
CKS1B-201ENST00000308987 ANKRD23Q86SG2 305 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 CREG2Q8IUH2 290 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 FAM184AQ8NB25 1140 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 TMEM87AQ8NBN3 555 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 BORCS6Q96GS4 357 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 ZNF341Q9BYN7 854 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 CEP44Q9C0F1 390 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 USP44Q9H0E7 712 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 ZNF552Q9H707 407 aaPredicted RBP5.74□□□□□ -1.49
CKS1B-201ENST00000308987 ZDHHC9Q9Y397 364 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 RFX7Q2KHR2 1363 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 CHD7Q9P2D1 2997 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 ZNFX1Q9P2E3 1918 aaKnown RBP5.74□□□□□ -1.49
CKS1B-201ENST00000308987 MROH5Q6ZUA9 1318 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 MYPNQ86TC9 1320 aa5.74□□□□□ -1.49
CKS1B-201ENST00000308987 RFXAPO00287 272 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 MX1P20591 662 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 CHMLP26374 656 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 MAPK1P28482 360 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 GSTT1P30711 240 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 MAPK8P45983 427 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 NEK4P51957 841 aa5.73□□□□□ -1.49
CKS1B-201ENST00000308987 PRMT2P55345 433 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms