RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 COPB2P35606 906 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 PSMC6P62333 389 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 HOOK3Q86VS8 718 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 CCDC197Q8NCU1 140 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 SLC30A5Q8TAD4 765 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 SLC35G2Q8TBE7 412 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 ERP44Q9BS26 406 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 SUFUQ9UMX1 484 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.85■□□□□ 0.29
DDX55-201ENST00000238146 ZNF335Q9H4Z2 1342 aaPredicted RBP16.85■□□□□ 0.29
DDX55-201ENST00000238146 WNK3Q9BYP7 1800 aa16.85■□□□□ 0.29
DDX55-201ENST00000238146 MMP14P50281 582 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 DR1Q01658 176 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 ADAT2Q7Z6V5 191 aaKnown RBP16.84■□□□□ 0.29
DDX55-201ENST00000238146 ADAM7Q9H2U9 754 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 ERVK-5Q9HDB9 667 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 COL5A3P25940 1745 aaPredicted RBP16.84■□□□□ 0.29
DDX55-201ENST00000238146 SPDYE3A6NKU9 549 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 CALUO43852 315 aaPredicted RBP16.84■□□□□ 0.29
DDX55-201ENST00000238146 MMEP08473 750 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 AKR1B1P15121 316 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 FERP16591 822 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 SLC16A2P36021 539 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 MMP13P45452 471 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 ELF3P78545 371 aaPredicted RBP16.84■□□□□ 0.29
DDX55-201ENST00000238146 PPATQ06203 517 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 PRPF4BQ13523 1007 aaKnown RBP16.84■□□□□ 0.29
DDX55-201ENST00000238146 E2F5Q15329 346 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 CATSPER3Q86XQ3 398 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 GLG1Q92896 1179 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 REEP2Q9BRK0 252 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 PABPC3Q9H361 631 aaKnown RBP16.84■□□□□ 0.29
DDX55-201ENST00000238146 NARFQ9UHQ1 456 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 DAAM1Q9Y4D1 1078 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 KIF13BQ9NQT8 1826 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 PLIN4Q96Q06 1357 aa16.84■□□□□ 0.29
DDX55-201ENST00000238146 USP17L15C9J2P7 530 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 USP17L13C9JLJ4 530 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 USP17L11C9JVI0 530 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 USP17L18D6R9N7 530 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 USP17L22D6RA61 530 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 USP17L17D6RBQ6 530 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 USP17L19D6RCP7 530 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 USP17L20D6RJB6 530 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 RGL2O15211 777 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 EVI5O60447 810 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 NR3C1P04150 777 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 PLCG2P16885 1265 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 PMS2P54278 862 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 KLRC3Q07444 240 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 USP17L24Q0WX57 530 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 PABPC4Q13310 644 aaKnown RBP eCLIP16.83■□□□□ 0.29
DDX55-201ENST00000238146 USP17L6PQ6QN14 398 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 GLYCTKQ8IVS8 523 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 ATXN2LQ8WWM7 1075 aaKnown RBP16.83■□□□□ 0.29
DDX55-201ENST00000238146 RNF25Q96BH1 459 aaPredicted RBP16.83■□□□□ 0.29
DDX55-201ENST00000238146 PGM2Q96G03 612 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 METTL14Q9HCE5 456 aaKnown RBP16.83■□□□□ 0.29
DDX55-201ENST00000238146 CEP83Q9Y592 693 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 NHSQ6T4R5 1651 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 IGSF9BQ9UPX0 1349 aa16.83■□□□□ 0.29
DDX55-201ENST00000238146 SLC26A4O43511 780 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 KIF1CO43896 1103 aaKnown RBP16.83■□□□□ 0.28
DDX55-201ENST00000238146 EZRP15311 586 aaKnown RBP16.83■□□□□ 0.28
DDX55-201ENST00000238146 PLS1Q14651 629 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 PIGWQ7Z7B1 504 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 NEK9Q8TD19 979 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 RFFLQ8WZ73 363 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 MXD3Q9BW11 206 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 VEZTQ9HBM0 779 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 GOPCQ9HD26 462 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.83■□□□□ 0.28
DDX55-201ENST00000238146 SBF2Q86WG5 1849 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 ASTN1O14525 1302 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 NCANO14594 1321 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 SPATA31A1Q5TZJ5 1347 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 IGKV6D-41A0A0C4DH26 115 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 USP17L10C9JJH3 530 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 MEIS1O00470 390 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 ZBTB5O15062 677 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 SLC8A1P32418 973 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 STAT1P42224 750 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 PLTPP55058 493 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 MSL1Q68DK7 614 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 DPP8Q6V1X1 898 aaPredicted RBP16.83■□□□□ 0.28
DDX55-201ENST00000238146 NAP1L4Q99733 375 aaKnown RBP16.83■□□□□ 0.28
DDX55-201ENST00000238146 SELENOSQ9BQE4 189 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 CARD9Q9H257 536 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 BCAS3Q9H6U6 928 aa16.83■□□□□ 0.28
DDX55-201ENST00000238146 TYW1Q9NV66 732 aaKnown RBP16.83■□□□□ 0.28
DDX55-201ENST00000238146 DIS3Q9Y2L1 958 aaKnown RBP16.83■□□□□ 0.28
DDX55-201ENST00000238146 TLDC2A0PJX2 215 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 CLIC2O15247 247 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 ASAP2O43150 1006 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 TMEM253P0C7T8 217 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 ABCB4P21439 1286 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 SF3A3Q12874 501 aaKnown RBP eCLIP16.82■□□□□ 0.287e-10■□□□□ 10.1
DDX55-201ENST00000238146 NBPF9Q3BBW0 867 aa16.82■□□□□ 0.28
DDX55-201ENST00000238146 HIBCHQ6NVY1 386 aaPredicted RBP16.82■□□□□ 0.28
DDX55-201ENST00000238146 ZDHHC24Q6UX98 284 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms