RNA–Protein interactions for RNA: ENST00000631006.2

SRGAP1-207, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SRGAP1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-207ENST00000631006 TRAPPC3O43617 180 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 DPYDQ12882 1025 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 FLOT2Q14254 428 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 FOXP4Q8IVH2 680 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 TRIM48Q8IWZ4 208 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 KDM4CQ9H3R0 1056 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 E2F6O75461 281 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 PFKFB1P16118 471 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 PPP6R3Q5H9R7 873 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 IRAK1BP1Q5VVH5 260 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 TOGARAM2Q6ZUX3 1019 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 STX19Q8N4C7 294 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 TTC8Q8TAM2 541 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 FOPNLQ96NB1 174 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 HACL1Q9UJ83 578 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 CFLARO15519 480 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 CLDN3O15551 220 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 IRF1P10914 325 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 CCDC15Q0P6D6 951 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 CTTNQ14247 550 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 FAM83BQ5T0W9 1011 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 PKN3Q6P5Z2 889 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 TBCKQ8TEA7 893 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 ZNF274Q96GC6 653 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 NGRNQ9NPE2 291 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 SH3BP1Q9Y3L3 701 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 KIF1BO60333 1816 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 ARHGEF12Q9NZN5 1544 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 ASB14A6NK59 587 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 MAFGO15525 162 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 HIP1RO75146 1068 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 SFSWAPQ12872 951 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 NME3Q13232 169 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 UBE2SQ16763 222 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 WHAMMP3Q1A5X7 153 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 LRRC24Q50LG9 513 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 DCAF4Q8WV16 495 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 NRBF2Q96F24 287 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 ATG3Q9NT62 314 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 KDM5AP29375 1690 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 PLS3P13797 630 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 PHKA1P46020 1223 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 CRKP46108 304 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 CACNB2Q08289 660 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 KRT80Q6KB66 452 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 MMS22LQ6ZRQ5 1243 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 TMEM179Q6ZVK1 233 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 AK8Q96MA6 479 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 KIFC3Q9BVG8 833 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 KLC2Q9H0B6 622 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 PACSIN2Q9UNF0 486 aaPredicted RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 SASH1O94885 1247 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 CENPAP49450 140 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 PEX3P56589 373 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 ZNF235Q14590 738 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 SNX17Q15036 470 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 MFN1Q8IWA4 741 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 PGBD4Q96DM1 585 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 KATNAL1Q9BW62 490 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 C2orf40Q9H1Z8 148 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 SEL1LQ9UBV2 794 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 PCDHB7Q9Y5E2 793 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 RNF123Q5XPI4 1314 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 TSPOAP1O95153 1857 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 HSPA4LO95757 839 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 ADORA2BP29275 332 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 EEF1DP29692 281 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 MXI1P50539 228 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 ESRRGP62508 458 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 CYP4F22Q6NT55 531 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 NAF1Q96HR8 494 aaKnown RBP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 RMDN3Q96TC7 470 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 OLFML3Q9NRN5 406 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 FGFR1OP2Q9NVK5 253 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 ASAP1Q9ULH1 1129 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 CAPN11Q9UMQ6 739 aa6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.88□□□□□ -1.31
SRGAP1-207ENST00000631006 AFF2P51816 1311 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 DFFAO00273 331 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 SGSM2O43147 1006 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 ALDH1A2O94788 518 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 GFPT2O94808 682 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 KRT17Q04695 432 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 NKX1-1Q15270 411 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 LRRC41Q15345 812 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 NBPF20Q3BBV1 942 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 NBPF10Q6P3W6 841 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 RMDN1Q96DB5 314 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 SERPINI1Q99574 410 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 UPF3AQ9H1J1 476 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 ELP3Q9H9T3 547 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 AAASQ9NRG9 546 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 ASNSD1Q9NWL6 643 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 SRP68Q9UHB9 627 aaKnown RBP6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 TRAPPC8Q9Y2L5 1435 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 UBA6A0AVT1 1052 aaPredicted RBP6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 KDM1AO60341 852 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 DDHD2O94830 711 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 IL13P35225 146 aa6.87□□□□□ -1.31
SRGAP1-207ENST00000631006 EHHADHQ08426 723 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms