RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 GHRHRQ02643 423 aa10.43□□□□□ -0.74
SYN3-213ENST00000619146 DNM1Q05193 864 aaKnown RBP10.43□□□□□ -0.74
SYN3-213ENST00000619146 RBL2Q08999 1139 aa10.43□□□□□ -0.74
SYN3-213ENST00000619146 HYAL1Q12794 435 aa10.43□□□□□ -0.74
SYN3-213ENST00000619146 MKRN4PQ13434 485 aaPredicted RBP10.43□□□□□ -0.74
SYN3-213ENST00000619146 NONOQ15233 471 aaKnown RBP eCLIP10.43□□□□□ -0.74
SYN3-213ENST00000619146 PUS10Q3MIT2 529 aaKnown RBP10.43□□□□□ -0.74
SYN3-213ENST00000619146 PLEKHG4Q58EX7 1191 aa10.43□□□□□ -0.74
SYN3-213ENST00000619146 MYSM1Q5VVJ2 828 aa10.43□□□□□ -0.74
SYN3-213ENST00000619146 PIK3AP1Q6ZUJ8 805 aa10.43□□□□□ -0.74
SYN3-213ENST00000619146 SP7Q8TDD2 431 aaPredicted RBP10.43□□□□□ -0.74
SYN3-213ENST00000619146 NSUN6Q8TEA1 469 aaKnown RBP10.43□□□□□ -0.74
SYN3-213ENST00000619146 ATP6V0A1Q93050 837 aa10.43□□□□□ -0.74
SYN3-213ENST00000619146 IFIH1Q9BYX4 1025 aaKnown RBP10.43□□□□□ -0.74
SYN3-213ENST00000619146 EHMT1Q9H9B1 1298 aa10.43□□□□□ -0.74
SYN3-213ENST00000619146 HAS3O00219 553 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 MEIS2O14770 477 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 OPLAHO14841 1288 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 TBX10O75333 385 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 GGPS1O95749 300 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 NCLP19338 710 aaKnown RBP10.42□□□□□ -0.74
SYN3-213ENST00000619146 PTMSP20962 102 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 IBSPP21815 317 aaPredicted RBP10.42□□□□□ -0.74
SYN3-213ENST00000619146 HSD17B4P51659 736 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 SP2Q02086 613 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 HSDL1Q3SXM5 330 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 JAKMIP3Q5VZ66 844 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 IL31RAQ8NI17 732 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 MFSD14AQ96MC6 490 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 SPATA33Q96N06 139 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 NAP1L4Q99733 375 aaKnown RBP10.42□□□□□ -0.74
SYN3-213ENST00000619146 KATNAL1Q9BW62 490 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 ALG13Q9NP73 1137 aaKnown RBP10.42□□□□□ -0.74
SYN3-213ENST00000619146 RTEL1Q9NZ71 1219 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 CEP131Q9UPN4 1083 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 FAM50BQ9Y247 325 aa10.42□□□□□ -0.74
SYN3-213ENST00000619146 EMSYQ7Z589 1322 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 C17orf102A2RUQ5 167 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 DDX11L8A8MPP1 907 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 YEATS4O95619 227 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 NR3C2P08235 984 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 SMIM10L2AP0DMW4 78 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 SMIM10L2BP0DMW5 78 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 HOXA13P31271 388 aaPredicted RBP10.41□□□□□ -0.74
SYN3-213ENST00000619146 USP11P51784 963 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 ORC2Q13416 577 aaPredicted RBP10.41□□□□□ -0.74
SYN3-213ENST00000619146 LAMC2Q13753 1193 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 UBE2SQ16763 222 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 FOXD4L6Q3SYB3 417 aaPredicted RBP10.41□□□□□ -0.74
SYN3-213ENST00000619146 FAM173BQ6P4H8 233 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 USP17L6PQ6QN14 398 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 FOXD4L3Q6VB84 417 aaPredicted RBP10.41□□□□□ -0.74
SYN3-213ENST00000619146 NEK8Q86SG6 692 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 SERINC5Q86VE9 423 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 FIBCD1Q8N539 461 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 PPTC7Q8NI37 304 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 RASGRP4Q8TDF6 673 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 KCNG4Q8TDN1 519 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 SEPT8Q92599 483 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 TOP1MTQ969P6 601 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 PBXIP1Q96AQ6 731 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 SAMD11Q96NU1 681 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 PXMP2Q9NR77 195 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 PRKAG3Q9UGI9 489 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 TELO2Q9Y4R8 837 aa10.41□□□□□ -0.74
SYN3-213ENST00000619146 TMEM221A6NGB7 291 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 M0R296 226 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 RGS20O76081 388 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 GCFC2P16383 781 aaKnown RBP10.4□□□□□ -0.74
SYN3-213ENST00000619146 SREBF1P36956 1147 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 NASPP49321 788 aaPredicted RBP10.4□□□□□ -0.74
SYN3-213ENST00000619146 NDUFV1P49821 464 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 TOB1P50616 345 aaPredicted RBP10.4□□□□□ -0.74
SYN3-213ENST00000619146 SP4Q02446 784 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 SMAD2Q15796 467 aaKnown RBP10.4□□□□□ -0.74
SYN3-213ENST00000619146 TTC38Q5R3I4 469 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 ADGRD2Q7Z7M1 963 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 TRIM50Q86XT4 487 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 TMEM87AQ8NBN3 555 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 TBCKQ8TEA7 893 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 SPATA32Q96LK8 384 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 USP28Q96RU2 1077 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 ANO3Q9BYT9 981 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 RNPEPQ9H4A4 650 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 SETD4Q9NVD3 440 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 TMEM260Q9NX78 707 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 TFIP11Q9UBB9 837 aaKnown RBP10.4□□□□□ -0.74
SYN3-213ENST00000619146 CD207Q9UJ71 328 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 RCOR1Q9UKL0 485 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 PCDHGC5Q9Y5F6 944 aa10.4□□□□□ -0.74
SYN3-213ENST00000619146 MORC2Q9Y6X9 1032 aaPredicted RBP10.4□□□□□ -0.74
SYN3-213ENST00000619146 LAD1O00515 517 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 ADAMTS3O15072 1205 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 FIBPO43427 364 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 EIF3JO75822 258 aaKnown RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 GHRP10912 638 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 ATP2B1P20020 1258 aa10.39□□□□□ -0.75
SYN3-213ENST00000619146 UBA1P22314 1058 aaKnown RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 SP100P23497 879 aaPredicted RBP10.39□□□□□ -0.75
SYN3-213ENST00000619146 MCM4P33991 863 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms