RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CNNM3Q8NE01 707 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 RDM1Q8NG50 284 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 RASSF8Q8NHQ8 419 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 ERMNQ8TAM6 284 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 NEK9Q8TD19 979 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 PIGOQ8TEQ8 1089 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 AFG1LQ8WV93 481 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 BADQ92934 168 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 CDK5RAP3Q96JB5 506 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 SPATA33Q96N06 139 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 AP5M1Q9H0R1 490 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 PRDM5Q9NQX1 630 aaPredicted RBP8.98□□□□□ -0.97
PCDH9-205ENST00000614931 KBTBD4Q9NVX7 518 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 GABBR1Q9UBS5 961 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 STK17AQ9UEE5 414 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 CCDC39Q9UFE4 941 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 SAMM50Q9Y512 469 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 PCDHA10Q9Y5I2 948 aa8.98□□□□□ -0.97
PCDH9-205ENST00000614931 SIP14410 1827 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 A0A0U1RQG5 324 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 MYMKA6NI61 221 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 DCDC2CA8MYV0 355 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 ARVCFO00192 962 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 DYNC1LI2O43237 492 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 LGR5O75473 907 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 CABYRO75952 493 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 LYPLA2O95372 231 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 EYA4O95677 639 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 PSAPP07602 524 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 HOXD8P13378 290 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 ITGB8P26012 769 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 TCF7P36402 384 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 QARSP47897 775 aaKnown RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 DPYDQ12882 1025 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 CUL4BQ13620 913 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 DHX8Q14562 1220 aaKnown RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 POSTNQ15063 836 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 FSCN1Q16658 493 aaKnown RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 UTP14CQ5TAP6 766 aaKnown RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 MIS18BP1Q6P0N0 1132 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 SLC43A3Q8NBI5 491 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 GIMAP8Q8ND71 665 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 OR6J1Q8NGC5 347 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 SEPT1Q8WYJ6 367 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 LARP4BQ92615 738 aaKnown RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 EMID1Q96A84 441 aaPredicted RBP8.97□□□□□ -0.97
PCDH9-205ENST00000614931 FUCA2Q9BTY2 467 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 RUSC1Q9BVN2 902 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 NT5C3AQ9H0P0 336 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 BLZF1Q9H2G9 400 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 TNMDQ9H2S6 317 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 CUEDC2Q9H467 287 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 MLXIPQ9HAP2 919 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 USP25Q9UHP3 1055 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 MROH7Q68CQ1 1323 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 EMSYQ7Z589 1322 aa8.97□□□□□ -0.97
PCDH9-205ENST00000614931 NPHP3-ACAD11A0A0J9YXS1 232 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 SYCE3A1L190 88 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 BACH1O14867 736 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 NKRFO15226 690 aaKnown RBP eCLIP8.96□□□□□ -0.98
PCDH9-205ENST00000614931 GTPBP6O43824 516 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-205ENST00000614931 KLRC4O43908 158 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 ZEB2O60315 1214 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 LGALS2P05162 132 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 MMP3P08254 477 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 PLA2G4BP0C869 781 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 ZNF286BP0CG31 522 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 RAG1P15918 1043 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 CYP11B2P19099 503 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 MUTP22033 750 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 NPEPPSP55786 919 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 PSMC5P62195 406 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 PRKCEQ02156 737 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 CACNB1Q02641 598 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-205ENST00000614931 LAMC2Q13753 1193 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 SHHQ15465 462 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 ARSHQ5FYA8 562 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 PLA2G4FQ68DD2 849 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 CXCL17Q6UXB2 119 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 ANO5Q75V66 913 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 FAM126BQ8IXS8 530 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 C4orf19Q8IY42 314 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 ELOA2Q8IYF1 753 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-205ENST00000614931 CEP57L1Q8IYX8 460 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 PPTC7Q8NI37 304 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 AFAP1L1Q8TED9 768 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 SYAP1Q96A49 352 aaPredicted RBP8.96□□□□□ -0.98
PCDH9-205ENST00000614931 VTI1AQ96AJ9 217 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 DNAJC19Q96DA6 116 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 CEP89Q96ST8 783 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 SH2D3AQ9BRG2 576 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 PYM1Q9BRP8 204 aaKnown RBP8.96□□□□□ -0.98
PCDH9-205ENST00000614931 SEZ6LQ9BYH1 1024 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 BHMT2Q9H2M3 363 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 ZSWIM4Q9H7M6 989 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 ZNF302Q9NR11 478 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 TMEM39AQ9NV64 488 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 TCEAL9Q9UHQ7 104 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 TUBE1Q9UJT0 475 aa8.96□□□□□ -0.98
PCDH9-205ENST00000614931 TBX21Q9UL17 535 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms